RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 NMIQ13287 307 aaPredicted RBP15.79■□□□□ 0.12
SLIRP-201ENST00000238688 KRT32Q14532 448 aa15.79■□□□□ 0.12
SLIRP-201ENST00000238688 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
SLIRP-201ENST00000238688 HELBQ8NG08 1087 aaPredicted RBP15.79■□□□□ 0.12
SLIRP-201ENST00000238688 ZNF408Q9H9D4 720 aa15.79■□□□□ 0.12
SLIRP-201ENST00000238688 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
SLIRP-201ENST00000238688 GOLIM4O00461 696 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 PSMA5P28066 241 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 ECE1P42892 770 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 SCARF1Q14162 830 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 ZMYM1Q5SVZ6 1142 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 CCDC102BQ68D86 513 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 C15orf52Q6ZUT6 534 aaKnown RBP15.78■□□□□ 0.12
SLIRP-201ENST00000238688 DSCC1Q9BVC3 393 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 MYOZ2Q9NPC6 264 aa15.78■□□□□ 0.12
SLIRP-201ENST00000238688 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
SLIRP-201ENST00000238688 HSPA8P11142 646 aaKnown RBP15.77■□□□□ 0.12
SLIRP-201ENST00000238688 TNS4Q8IZW8 715 aa15.77■□□□□ 0.12
SLIRP-201ENST00000238688 DCPSQ96C86 337 aaKnown RBP15.77■□□□□ 0.12
SLIRP-201ENST00000238688 ZIC5Q96T25 663 aa15.77■□□□□ 0.12
SLIRP-201ENST00000238688 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
SLIRP-201ENST00000238688 A0A0D9SFI3 127 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 ADORA1P30542 326 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 CTCFP49711 727 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-201ENST00000238688 LBX1P52954 281 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-201ENST00000238688 GRM1Q13255 1194 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 NECTIN1Q15223 517 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 UBE3CQ15386 1083 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 CAVIN4Q5BKX8 364 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 ANGEL2Q5VTE6 544 aaKnown RBP15.76■□□□□ 0.11
SLIRP-201ENST00000238688 PAXIP1Q6ZW49 1069 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-201ENST00000238688 APPBP2Q92624 585 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 CD209Q9NNX6 404 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 CASP8AP2Q9UKL3 1982 aa15.76■□□□□ 0.11
SLIRP-201ENST00000238688 ECM29Q5VYK3 1845 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 MAP2K2P36507 400 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 KCNJ4P48050 445 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 NBPF9Q3BBW0 867 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 TTLL5Q6EMB2 1281 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 CDCA5Q96FF9 252 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 ZBED3Q96IU2 234 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-201ENST00000238688 FAM227BQ96M60 508 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 GBA2Q9HCG7 927 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-201ENST00000238688 CWC22Q9HCG8 908 aaKnown RBP15.75■□□□□ 0.11
SLIRP-201ENST00000238688 CTNNA3Q9UI47 895 aa15.75■□□□□ 0.11
SLIRP-201ENST00000238688 SCAF8Q9UPN6 1271 aaKnown RBP15.75■□□□□ 0.11
SLIRP-201ENST00000238688 FAM155AB1AL88 458 aaPredicted RBP15.74■□□□□ 0.11
SLIRP-201ENST00000238688 WNT10BO00744 389 aa15.74■□□□□ 0.11
SLIRP-201ENST00000238688 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
SLIRP-201ENST00000238688 MCAMP43121 646 aa15.74■□□□□ 0.11
SLIRP-201ENST00000238688 HUNKP57058 714 aa15.74■□□□□ 0.11
SLIRP-201ENST00000238688 GTF2IP78347 998 aa15.74■□□□□ 0.11
SLIRP-201ENST00000238688 CERS5Q8N5B7 392 aa15.74■□□□□ 0.11
SLIRP-201ENST00000238688 SPATA5Q8NB90 893 aa15.74■□□□□ 0.11
SLIRP-201ENST00000238688 AIDAQ96BJ3 306 aa15.74■□□□□ 0.11
SLIRP-201ENST00000238688 ALDH8A1Q9H2A2 487 aaPredicted RBP15.74■□□□□ 0.11
SLIRP-201ENST00000238688 RPAP1Q9BWH6 1393 aaPredicted RBP15.74■□□□□ 0.11
SLIRP-201ENST00000238688 ZMYM6O95789 1325 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 MYO3BQ8WXR4 1341 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 PITPNM2Q9BZ72 1349 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 MAST2Q6P0Q8 1798 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 HSP90AA1P07900 732 aaKnown RBP15.73■□□□□ 0.11
SLIRP-201ENST00000238688 PDIA4P13667 645 aaKnown RBP15.73■□□□□ 0.11
SLIRP-201ENST00000238688 IL1R1P14778 569 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 MAP3K12Q12852 859 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 SULF1Q8IWU6 871 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 INTS4Q96HW7 963 aaKnown RBP15.73■□□□□ 0.11
SLIRP-201ENST00000238688 IL25Q9H293 177 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 ANTXR1Q9H6X2 564 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 CHMP5Q9NZZ3 219 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 DENND2AQ9ULE3 1009 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 RBM8AQ9Y5S9 174 aaKnown RBP15.73■□□□□ 0.11
SLIRP-201ENST00000238688 SNX14Q9Y5W7 946 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 LAMA4Q16363 1823 aa15.73■□□□□ 0.11
SLIRP-201ENST00000238688 ZAP70P43403 619 aa15.72■□□□□ 0.11
SLIRP-201ENST00000238688 PHKA1P46020 1223 aa15.72■□□□□ 0.11
SLIRP-201ENST00000238688 NEK4P51957 841 aa15.72■□□□□ 0.11
SLIRP-201ENST00000238688 ANKRD1Q15327 319 aa15.72■□□□□ 0.11
SLIRP-201ENST00000238688 VPS53Q5VIR6 699 aa15.72■□□□□ 0.11
SLIRP-201ENST00000238688 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
SLIRP-201ENST00000238688 PAPPA2Q9BXP8 1791 aa15.72■□□□□ 0.11
SLIRP-201ENST00000238688 MYO5AQ9Y4I1 1855 aaKnown RBP15.71■□□□□ 0.11
SLIRP-201ENST00000238688 ADD2P35612 726 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 CREB3L3Q68CJ9 461 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 RGMBQ6NW40 437 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 C2orf69Q8N8R5 385 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 CHMP4CQ96CF2 233 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 ZSWIM6Q9HCJ5 1215 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 PCDHAC2Q9Y5I4 1007 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 CYP46A1Q9Y6A2 500 aa15.71■□□□□ 0.11
SLIRP-201ENST00000238688 CYP2E1P05181 493 aaPredicted RBP15.7■□□□□ 0.1
SLIRP-201ENST00000238688 GNAT2P19087 354 aa15.7■□□□□ 0.1
SLIRP-201ENST00000238688 PTH1RQ03431 593 aa15.7■□□□□ 0.1
SLIRP-201ENST00000238688 RASGRF1Q13972 1273 aa15.7■□□□□ 0.1
SLIRP-201ENST00000238688 FBXO33Q7Z6M2 555 aa15.7■□□□□ 0.1
SLIRP-201ENST00000238688 ZGPATQ8N5A5 531 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms