RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ZNF202O95125 648 aa20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 CHGBP05060 677 aa20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 SNRPA1P09661 255 aaKnown RBP20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 KCNG4Q8TDN1 519 aa20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 MAP2K7O14733 419 aa20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 TAF7LQ5H9L4 462 aa20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 GOLGA1Q92805 767 aa20.36■□□□□ 0.85
CDKN1B-201ENST00000228872 CARMIL3Q8ND23 1372 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 SERPINC1P01008 464 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 CFAP100Q494V2 611 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 JAKMIP3Q5VZ66 844 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 GRM8O00222 908 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 TOP1P11387 765 aaKnown RBP20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 ISM2Q6H9L7 571 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 CTR9Q6PD62 1173 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 KIFC2Q96AC6 838 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 ZFP91Q96JP5 570 aaPredicted RBP20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 AGXT2Q9BYV1 514 aa20.35■□□□□ 0.85
CDKN1B-201ENST00000228872 CCDC151A5D8V7 595 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 GOLGA6L9A6NEM1 432 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 TMEM232C9JQI7 657 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 YEATS4O95619 227 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 SPTLC2O15270 562 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 TXLNAP40222 546 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 AIMP1Q12904 312 aaKnown RBP20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 PDIA6Q15084 440 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
CDKN1B-201ENST00000228872 ATP5JP18859 108 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 EXOSC10Q01780 885 aaKnown RBP20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 BRD3Q15059 726 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 MCMDC2Q4G0Z9 681 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 KLHDC4Q8TBB5 520 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 ZBTB9Q96C00 473 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 POLR3EQ9NVU0 708 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 UTYO14607 1347 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 RFX7Q2KHR2 1363 aa20.33■□□□□ 0.85
CDKN1B-201ENST00000228872 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.84
CDKN1B-201ENST00000228872 MYL5Q02045 173 aa20.33■□□□□ 0.84
CDKN1B-201ENST00000228872 PTPN21Q16825 1174 aa20.33■□□□□ 0.84
CDKN1B-201ENST00000228872 LEKR1Q6ZMV7 388 aa20.33■□□□□ 0.84
CDKN1B-201ENST00000228872 DHX58Q96C10 678 aa20.33■□□□□ 0.84
CDKN1B-201ENST00000228872 NDUFB9Q9Y6M9 179 aa20.33■□□□□ 0.84
CDKN1B-201ENST00000228872 EXOC5O00471 708 aa20.32■□□□□ 0.84
CDKN1B-201ENST00000228872 IVLP07476 585 aa20.32■□□□□ 0.84
CDKN1B-201ENST00000228872 PDIA3P30101 505 aaKnown RBP20.32■□□□□ 0.84
CDKN1B-201ENST00000228872 YY1AP1Q9H869 796 aa20.32■□□□□ 0.84
CDKN1B-201ENST00000228872 PFKFB1P16118 471 aa20.32■□□□□ 0.84
CDKN1B-201ENST00000228872 OTUD7BQ6GQQ9 843 aa20.32■□□□□ 0.84
CDKN1B-201ENST00000228872 SPATA31A6Q5VVP1 1343 aa20.32■□□□□ 0.84
CDKN1B-201ENST00000228872 DDX58O95786 925 aaKnown RBP20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 POLR3DP05423 398 aaPredicted RBP20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 BAG1Q99933 345 aaPredicted RBP20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 VPS18Q9P253 973 aa20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 TUBE1Q9UJT0 475 aa20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 DBNLQ9UJU6 430 aaKnown RBP20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 DOT1LQ8TEK3 1739 aa20.31■□□□□ 0.84
CDKN1B-201ENST00000228872 MYL6BP14649 208 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 AXDND1Q5T1B0 1012 aaPredicted RBP20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 BARGINQ6ZT62 677 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 GOLGA6L1Q8N7Z2 621 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 ZNF274Q96GC6 653 aaPredicted RBP20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 PDE11AQ9HCR9 933 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 CMA1P23946 247 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 ICE2Q659A1 982 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 TOGARAM2Q6ZUX3 1019 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 INTS13Q9NVM9 706 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
CDKN1B-201ENST00000228872 MROH7-TTC4A0A0A0MT08 1334 aa20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 RPS6KA5O75582 802 aa20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 GTF2A1P52655 376 aaPredicted RBP20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 TBX2Q13207 712 aaPredicted RBP20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 MYSM1Q5VVJ2 828 aa20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 A0A1B0GUL7 405 aa20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 BEND6Q5SZJ8 279 aaPredicted RBP20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 HNRNPLLQ8WVV9 542 aaKnown RBP20.29■□□□□ 0.84
CDKN1B-201ENST00000228872 LAMA4Q16363 1823 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 BCL9LQ86UU0 1499 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 MYO1BO43795 1136 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 STX10O60499 249 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 MCM6Q14566 821 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 LRP10Q7Z4F1 713 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 RIC3Q7Z5B4 369 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 FANCLQ9NW38 375 aa20.28■□□□□ 0.84
CDKN1B-201ENST00000228872 MAGEA9P43362 315 aa20.27■□□□□ 0.84
CDKN1B-201ENST00000228872 FOXR1Q6PIV2 292 aa20.27■□□□□ 0.84
CDKN1B-201ENST00000228872 CCDC12Q8WUD4 166 aaPredicted RBP20.27■□□□□ 0.84
CDKN1B-201ENST00000228872 C8orf76Q96K31 380 aa20.27■□□□□ 0.84
CDKN1B-201ENST00000228872 ZSWIM4Q9H7M6 989 aa20.27■□□□□ 0.84
CDKN1B-201ENST00000228872 BCL9O00512 1426 aa20.27■□□□□ 0.84
CDKN1B-201ENST00000228872 CHMP4BP1P59074 171 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 TNNI3KQ59H18 835 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 ANO1Q5XXA6 986 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 HDXQ7Z353 690 aa20.27■□□□□ 0.83
CDKN1B-201ENST00000228872 BRAPQ7Z569 592 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms