RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 LAMB1P07942 1786 aa21.28■■□□□ 1
MRPL28-201ENST00000199706 MYO5AQ9Y4I1 1855 aaKnown RBP21.27■■□□□ 1
MRPL28-201ENST00000199706 GPR75-ASB3A0A0A6YYF3 556 aa21.27■■□□□ 1
MRPL28-201ENST00000199706 PPP1R12BO60237 982 aaPredicted RBP21.27■■□□□ 1
MRPL28-201ENST00000199706 NPM3O75607 178 aaKnown RBP21.27■■□□□ 1
MRPL28-201ENST00000199706 CYP2E1P05181 493 aaPredicted RBP21.27■■□□□ 1
MRPL28-201ENST00000199706 NOGQ13253 232 aa21.27■■□□□ 1
MRPL28-201ENST00000199706 HDAC1Q13547 482 aaPredicted RBP21.27■■□□□ 1
MRPL28-201ENST00000199706 CDC42EP5Q6NZY7 148 aa21.27■■□□□ 1
MRPL28-201ENST00000199706 ARMC9Q7Z3E5 817 aa21.27■■□□□ 1
MRPL28-201ENST00000199706 ZNF384Q8TF68 577 aa21.27■■□□□ 1
MRPL28-201ENST00000199706 IDI2Q9BXS1 227 aa21.27■■□□□ 1
MRPL28-201ENST00000199706 LDLRAD1Q5T700 205 aa21.26■□□□□ 0.99
MRPL28-201ENST00000199706 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
MRPL28-201ENST00000199706 CYP4F22Q6NT55 531 aa21.26■□□□□ 0.99
MRPL28-201ENST00000199706 LRP2BPQ9P2M1 347 aa21.26■□□□□ 0.99
MRPL28-201ENST00000199706 TCP10L2B9ZVM9 353 aa21.25■□□□□ 0.99
MRPL28-201ENST00000199706 SLC10A3P09131 477 aa21.25■□□□□ 0.99
MRPL28-201ENST00000199706 ZAP70P43403 619 aa21.25■□□□□ 0.99
MRPL28-201ENST00000199706 TBC1D9Q6ZT07 1266 aa21.25■□□□□ 0.99
MRPL28-201ENST00000199706 FAM151AQ8WW52 585 aa21.25■□□□□ 0.99
MRPL28-201ENST00000199706 RAI14Q9P0K7 980 aa21.25■□□□□ 0.99
MRPL28-201ENST00000199706 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
MRPL28-201ENST00000199706 OTOFQ9HC10 1997 aa21.25■□□□□ 0.99
MRPL28-201ENST00000199706 FAM155AB1AL88 458 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-201ENST00000199706 APBB1O00213 710 aa21.24■□□□□ 0.99
MRPL28-201ENST00000199706 ENTPD3O75355 529 aa21.24■□□□□ 0.99
MRPL28-201ENST00000199706 MAP2K1Q02750 393 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-201ENST00000199706 TTF1Q15361 905 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-201ENST00000199706 NBPF12Q5TAG4 269 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-201ENST00000199706 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
MRPL28-201ENST00000199706 SNRKQ9NRH2 765 aa21.24■□□□□ 0.99
MRPL28-201ENST00000199706 FOCADQ5VW36 1801 aa21.23■□□□□ 0.99
MRPL28-201ENST00000199706 ATP5JP18859 108 aa21.23■□□□□ 0.99
MRPL28-201ENST00000199706 BTDP43251 543 aa21.23■□□□□ 0.99
MRPL28-201ENST00000199706 ZNF157P51786 506 aaPredicted RBP21.23■□□□□ 0.99
MRPL28-201ENST00000199706 PAXIP1Q6ZW49 1069 aaPredicted RBP21.23■□□□□ 0.99
MRPL28-201ENST00000199706 REM2Q8IYK8 340 aaPredicted RBP21.23■□□□□ 0.99
MRPL28-201ENST00000199706 TMEM39BQ9GZU3 492 aa21.23■□□□□ 0.99
MRPL28-201ENST00000199706 USP40Q9NVE5 1235 aa21.23■□□□□ 0.99
MRPL28-201ENST00000199706 IREB2P48200 963 aaKnown RBP21.22■□□□□ 0.99
MRPL28-201ENST00000199706 CACNB3P54284 484 aa21.22■□□□□ 0.99
MRPL28-201ENST00000199706 RHBDL3P58872 404 aa21.22■□□□□ 0.99
MRPL28-201ENST00000199706 PPP4CP60510 307 aa21.22■□□□□ 0.99
MRPL28-201ENST00000199706 TTLL12Q14166 644 aaPredicted RBP21.22■□□□□ 0.99
MRPL28-201ENST00000199706 NAA16Q6N069 864 aaPredicted RBP21.22■□□□□ 0.99
MRPL28-201ENST00000199706 RASAL3Q86YV0 1011 aa21.22■□□□□ 0.99
MRPL28-201ENST00000199706 WDHD1O75717 1129 aaPredicted RBP21.21■□□□□ 0.99
MRPL28-201ENST00000199706 PLCG2P16885 1265 aa21.21■□□□□ 0.99
MRPL28-201ENST00000199706 GCC1Q96CN9 775 aa21.21■□□□□ 0.99
MRPL28-201ENST00000199706 PIH1D3Q9NQM4 214 aaKnown RBP21.21■□□□□ 0.99
MRPL28-201ENST00000199706 WBP1LQ9NX94 342 aa21.21■□□□□ 0.99
MRPL28-201ENST00000199706 FAM198AQ9UFP1 575 aa21.21■□□□□ 0.99
MRPL28-201ENST00000199706 ANGEL1Q9UNK9 670 aaKnown RBP21.21■□□□□ 0.99
MRPL28-201ENST00000199706 SUPT16HQ9Y5B9 1047 aaKnown RBP21.21■□□□□ 0.99
MRPL28-201ENST00000199706 ATRNL1Q5VV63 1379 aa21.21■□□□□ 0.99
MRPL28-201ENST00000199706 CDK5RAP2Q96SN8 1893 aa21.2■□□□□ 0.98
MRPL28-201ENST00000199706 UBE2Q2LH0YL09 131 aa21.2■□□□□ 0.98
MRPL28-201ENST00000199706 BAG3O95817 575 aa21.2■□□□□ 0.98
MRPL28-201ENST00000199706 MAP3K12Q12852 859 aa21.2■□□□□ 0.98
MRPL28-201ENST00000199706 NFIAQ12857 509 aa21.2■□□□□ 0.98
MRPL28-201ENST00000199706 GPATCH3Q96I76 525 aa21.2■□□□□ 0.98
MRPL28-201ENST00000199706 MYH7P12883 1935 aa21.19■□□□□ 0.98
MRPL28-201ENST00000199706 CA12O43570 354 aa21.19■□□□□ 0.98
MRPL28-201ENST00000199706 DCAF15Q66K64 600 aa21.19■□□□□ 0.98
MRPL28-201ENST00000199706 MOB2Q70IA6 237 aa21.19■□□□□ 0.98
MRPL28-201ENST00000199706 ANKRD13AQ8IZ07 590 aa21.19■□□□□ 0.98
MRPL28-201ENST00000199706 HAUS7Q99871 368 aa21.19■□□□□ 0.98
MRPL28-201ENST00000199706 NOL10Q9BSC4 688 aaKnown RBP21.19■□□□□ 0.98
MRPL28-201ENST00000199706 ECHDC1Q9NTX5 307 aa21.19■□□□□ 0.98
MRPL28-201ENST00000199706 AK9Q5TCS8 1911 aa21.18■□□□□ 0.98
MRPL28-201ENST00000199706 USP2O75604 605 aaPredicted RBP21.18■□□□□ 0.98
MRPL28-201ENST00000199706 HSPA1AP0DMV8 641 aaKnown RBP21.18■□□□□ 0.98
MRPL28-201ENST00000199706 HSPA1BP0DMV9 641 aaKnown RBP21.18■□□□□ 0.98
MRPL28-201ENST00000199706 RGS3P49796 1198 aa21.18■□□□□ 0.98
MRPL28-201ENST00000199706 CDAN1Q8IWY9 1227 aa21.18■□□□□ 0.98
MRPL28-201ENST00000199706 AOC2O75106 756 aa21.17■□□□□ 0.98
MRPL28-201ENST00000199706 IDH1O75874 414 aaKnown RBP21.17■□□□□ 0.98
MRPL28-201ENST00000199706 ZBTB48P10074 688 aaPredicted RBP21.17■□□□□ 0.98
MRPL28-201ENST00000199706 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.17■□□□□ 0.984e-8■■□□□ 12.7
MRPL28-201ENST00000199706 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
MRPL28-201ENST00000199706 SMARCA5O60264 1052 aaPredicted RBP21.16■□□□□ 0.98
MRPL28-201ENST00000199706 AIDAQ96BJ3 306 aa21.16■□□□□ 0.98
MRPL28-201ENST00000199706 ANTXR1Q9H6X2 564 aa21.16■□□□□ 0.98
MRPL28-201ENST00000199706 MAP3K10Q02779 954 aa21.15■□□□□ 0.98
MRPL28-201ENST00000199706 GRM1Q13255 1194 aa21.15■□□□□ 0.98
MRPL28-201ENST00000199706 ADGRA1Q86SQ6 560 aa21.15■□□□□ 0.98
MRPL28-201ENST00000199706 SMC5Q8IY18 1101 aa21.15■□□□□ 0.98
MRPL28-201ENST00000199706 EXOC6Q8TAG9 804 aa21.15■□□□□ 0.98
MRPL28-201ENST00000199706 RWDD1Q9H446 243 aaPredicted RBP21.15■□□□□ 0.98
MRPL28-201ENST00000199706 PAG1Q9NWQ8 432 aa21.15■□□□□ 0.98
MRPL28-201ENST00000199706 CYP7A1P22680 504 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 TCP10Q12799 353 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 PRKG1Q13976 671 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 SPRYD7Q5W111 196 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 MAGEB6Q8N7X4 407 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 BEGAINQ9BUH8 593 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 ZNF341Q9BYN7 854 aa21.14■□□□□ 0.97
MRPL28-201ENST00000199706 DDX4Q9NQI0 724 aaKnown RBP21.14■□□□□ 0.97
MRPL28-201ENST00000199706 SAGE1Q9NXZ1 904 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms