RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
SCARB2-221ENST00000640341 CEACAM4O75871 244 aa11.71□□□□□ -0.54
SCARB2-221ENST00000640341 PRRX1P54821 245 aa11.71□□□□□ -0.54
SCARB2-221ENST00000640341 PRNTQ86SH4 94 aa11.71□□□□□ -0.54
SCARB2-221ENST00000640341 CIARTQ8N365 385 aaPredicted RBP11.71□□□□□ -0.54
SCARB2-221ENST00000640341 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.54
SCARB2-221ENST00000640341 DLEU1O43261 78 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 CNIH1O95406 144 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 THBDP07204 575 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 PRSS33Q8NF86 280 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 PIEZO1Q92508 2521 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 LY6HO94772 140 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 RNASE6Q93091 150 aaKnown RBP11.7□□□□□ -0.54
SCARB2-221ENST00000640341 Q9H3A6 140 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 EBLN2Q6P2I7 272 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 GOLT1AQ6ZVE7 132 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 STPG4Q8N801 248 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 LINC00574Q9H8X3 128 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 UQCR10Q9UDW1 63 aa11.7□□□□□ -0.54
SCARB2-221ENST00000640341 TCF21O43680 179 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 COL8A1P27658 744 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 RALYQ9UKM9 306 aaKnown RBP11.69□□□□□ -0.54
SCARB2-221ENST00000640341 COX19Q49B96 90 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 GPR82Q96P67 336 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 FAM181BA6NEQ2 426 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 IGLC2P0DOY2 106 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 IGLC3P0DOY3 106 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 ATP5IP56385 69 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-221ENST00000640341 PNKDQ8N490 385 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 NUP37Q8NFH4 326 aa11.69□□□□□ -0.54
SCARB2-221ENST00000640341 VSTM5A8MXK1 200 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 CHEK1O14757 476 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 SIAH2O43255 324 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 SSX8Q7RTT4 187 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 LAMTOR2Q9Y2Q5 125 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 PSG1P11464 419 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 KLF17Q5JT82 389 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-221ENST00000640341 LINC00173Q6ZV60 143 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 ALKBH7Q9BT30 221 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-221ENST00000640341 HILPDAQ9Y5L2 63 aa11.68□□□□□ -0.54
SCARB2-221ENST00000640341 MUC21A0A0G2JKD1 596 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 MUC21A0A140T8X8 626 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 MUC21Q5SSG8 566 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 IGFL3Q6UXB1 125 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 RPEQ96AT9 228 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 IGHV1-69-2A0A0G2JMI3 117 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 TCTAP57738 103 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
SCARB2-221ENST00000640341 ONECUT1Q9UBC0 465 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 MC5RP33032 325 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 HBBP68871 147 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 LINC01560Q8TB33 94 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 GTSF1Q8WW33 167 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 C17orf77Q96MU5 243 aa11.67□□□□□ -0.54
SCARB2-221ENST00000640341 TMSB15BA0A087X1C1 80 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 E7EQL1 145 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 TMEM30BQ3MIR4 351 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 ETFRF1Q6IPR1 90 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 UNQ5815/PRO19632Q6UWF5 114 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 IGHV2-26A0A0B4J1V2 119 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 BTF3P20290 206 aaKnown RBP11.66□□□□□ -0.54
SCARB2-221ENST00000640341 PPP1R27Q86WC6 154 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 KLHDC1Q8N7A1 406 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 MBD6Q96DN6 1003 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 HIGD1AQ9Y241 93 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 PTPRQQ9UMZ3 2332 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 A8MWL6 223 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 TCRAP04437 139 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 CTRLP40313 264 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 PCP4P48539 62 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 HES1Q14469 280 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 RASL11BQ9BPW5 248 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
SCARB2-221ENST00000640341 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 TMEM155Q4W5P6 130 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 STXBP6Q8NFX7 210 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 MAP1AP78559 2803 aaPredicted RBP11.65□□□□□ -0.54
SCARB2-221ENST00000640341 FSTL3O95633 263 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 IGLL1P15814 213 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 LGALS7P47929 136 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 SPATA12Q7Z6I5 190 aa11.65□□□□□ -0.54
SCARB2-221ENST00000640341 hDV102S1A0JD36 115 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 OR4A5Q8NH83 315 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
SCARB2-221ENST00000640341 FAM90A27PA6NNH2 459 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 CHRDL1Q9BU40 450 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 IGHV1-3A0A0C4DH29 117 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 CBY1Q9Y3M2 126 aa11.64□□□□□ -0.55
SCARB2-221ENST00000640341 M0R3E3 92 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 IGHV3-23P01764 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms