RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 LINC01545Q5VT33 79 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 BPIFA4PQ86YQ2 179 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 C11orf53Q8IXP5 236 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 RFESDQ8TAC1 157 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 PSMG3-AS1Q96PY0 264 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 GNG12Q9UBI6 72 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 PRNDQ9UKY0 176 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 C9orf118A6NHY6 69 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 TIMM8AO60220 97 aaPredicted RBP17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 OR1B1Q8NGR6 318 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 ZNF714Q96N38 554 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 CXXC4Q9H2H0 198 aa17.67■□□□□ 0.42
POLR2J3-220ENST00000613744 A0A1W2PPR1 153 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 A6NDN8 102 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 SMIM17P0DL12 118 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 COX6B1P14854 86 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 C2orf83Q53S99 150 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 TMEM97Q5BJF2 176 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 ZNF329Q86UD4 541 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 AP1S3Q96PC3 154 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 SLC25A2Q9BXI2 301 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 GFRA4Q9GZZ7 299 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 TP73-AS1Q9UF72 201 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 OR51B2Q9Y5P1 312 aa17.66■□□□□ 0.42
POLR2J3-220ENST00000613744 A0A087X0K7 114 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 WNT9BO14905 357 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 HTR1DP28221 377 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 C2orf91Q6ZV80 131 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 PLCE1Q9P212 2302 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 PSMB11A5LHX3 300 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 E7EQL1 145 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 K7EP34 96 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 GLRXP35754 106 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 NEGR1Q7Z3B1 354 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 ADTRPQ96IZ2 230 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 IFI27L2Q9H2X8 130 aa17.65■□□□□ 0.42
POLR2J3-220ENST00000613744 SH2D7A6NKC9 451 aaPredicted RBP17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 A8MWL6 223 aa17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 F2RL2O00254 374 aa17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 SAP30O75446 220 aa17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 SCGB1A1P11684 91 aa17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 S100A7P31151 101 aa17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 PRCDQ00LT1 54 aa17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 MBNL2Q5VZF2 373 aaKnown RBP17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 LHFPL4Q7Z7J7 247 aa17.64■□□□□ 0.41
POLR2J3-220ENST00000613744 IGKV1OR2-108A0A075B7D4 117 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 FAM231BA6NCW3 169 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 COL8A2P25067 703 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 RIPPLY3P57055 190 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 LINC00173Q6ZV60 143 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 OR5A1Q8NGJ0 315 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 RPP21Q9H633 154 aaKnown RBP17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 ZNF492Q9P255 531 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 IGHV3-64DA0A0J9YX35 117 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 VWC2LB2RUY7 222 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 RPL39P5Q59GN2 51 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 NUP37Q8NFH4 326 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 OR1L8Q8NGR8 309 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 CACNG8Q8WXS5 425 aa17.63■□□□□ 0.41
POLR2J3-220ENST00000613744 WDR82Q6UXN9 313 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 OR1L4Q8NGR5 311 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 TNFRSF14Q92956 283 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 PRSS22Q9GZN4 317 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 FAM234AQ9H0X4 552 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 CELSR2Q9HCU4 2923 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 ADIPOQQ15848 244 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 ZNF672Q499Z4 452 aaPredicted RBP17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 TPRX1Q8N7U7 411 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 LINC00479Q96M42 142 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 KLF12Q9Y4X4 402 aa17.62■□□□□ 0.41
POLR2J3-220ENST00000613744 NBPF19A0A087WUL8 3843 aa17.61■□□□□ 0.41
POLR2J3-220ENST00000613744 PPP1R35Q8TAP8 253 aa17.61■□□□□ 0.41
POLR2J3-220ENST00000613744 PAXXQ9BUH6 204 aa17.61■□□□□ 0.41
POLR2J3-220ENST00000613744 RAB9BQ9NP90 201 aa17.61■□□□□ 0.41
POLR2J3-220ENST00000613744 LOC102724200A0A096LPH7 203 aaPredicted RBP17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 LOXL3P58215 753 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 ZNF826PQ6ZT77 177 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 OR1N2Q8NGR9 330 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 METRNQ9UJH8 293 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 MYCNOSP40205 109 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 CD69Q07108 199 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 ZNF841Q6ZN19 808 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 C5orf17Q8NAS9 161 aa17.6■□□□□ 0.41
POLR2J3-220ENST00000613744 LTC4SQ16873 150 aa17.59■□□□□ 0.41
POLR2J3-220ENST00000613744 RBPMS2Q6ZRY4 209 aaKnown RBP17.59■□□□□ 0.41
POLR2J3-220ENST00000613744 LRRC29Q8WV35 223 aa17.59■□□□□ 0.41
POLR2J3-220ENST00000613744 GPR82Q96P67 336 aa17.59■□□□□ 0.41
POLR2J3-220ENST00000613744 UBTD1Q9HAC8 227 aa17.59■□□□□ 0.41
POLR2J3-220ENST00000613744 SIVA1O15304 175 aa17.59■□□□□ 0.41
POLR2J3-220ENST00000613744 DCTN5Q9BTE1 182 aa17.59■□□□□ 0.41
POLR2J3-220ENST00000613744 MGST3O14880 152 aa17.58■□□□□ 0.4
POLR2J3-220ENST00000613744 IGHV3-13P01766 116 aa17.58■□□□□ 0.4
POLR2J3-220ENST00000613744 FOXA3P55318 350 aaPredicted RBP17.58■□□□□ 0.4
POLR2J3-220ENST00000613744 MLST8Q9BVC4 326 aa17.58■□□□□ 0.4
POLR2J3-220ENST00000613744 CENPEQ02224 2701 aa17.58■□□□□ 0.4
POLR2J3-220ENST00000613744 SRRM4A7MD48 611 aaKnown RBP17.57■□□□□ 0.4
POLR2J3-220ENST00000613744 UPK2O00526 184 aa17.57■□□□□ 0.4
POLR2J3-220ENST00000613744 APOA2P02652 100 aa17.57■□□□□ 0.4
POLR2J3-220ENST00000613744 CD177Q8N6Q3 437 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms