RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CISD3P0C7P0 127 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 A0A1W2PPI3 338 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 VCYO14598 125 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 ZIC3O60481 467 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 MYF5P13349 255 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 DEFB103AP81534 67 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 TEN1Q86WV5 123 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 STPG4Q8N801 248 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 M0R381 172 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 SUPT4H1P63272 117 aaKnown RBP7.32□□□□□ -1.24
TTC28-208ENST00000612946 PRO1854Q9UHT4 67 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 FBXL7Q9UJT9 491 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 BDP1A6H8Y1 2624 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 CCL25O15444 150 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 ATP5EP56381 51 aaPredicted RBP7.32□□□□□ -1.24
TTC28-208ENST00000612946 ZC2HC1BQ5TFG8 222 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 MRAPQ8TCY5 172 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 FAM74A4Q5TZK3 123 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 CCL4L1Q8NHW4 92 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 RASL10AQ92737 203 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 MALP21145 153 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 HCP5Q6MZN7 132 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 NABP1Q96AH0 204 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 G3V4G9 280 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 TGFAP01135 160 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 SLC25A16P16260 332 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 CRYBA2P53672 197 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 EIF4EBP2Q13542 120 aaPredicted RBP7.32□□□□□ -1.24
TTC28-208ENST00000612946 MST1LQ2TV78 715 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 HIGD1BQ9P298 99 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 SMIM27A0A1W2PRY6 76 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 CRYBA4P53673 196 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 ACP7Q6ZNF0 438 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 TIMM23O14925 209 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 LCN12Q6JVE5 192 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 SFTA2Q6UW10 78 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 ABHD12Q8N2K0 398 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 TIMM21Q9BVV7 248 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 PATE1Q8WXA2 126 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 KNCNA6PVL3 124 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 ZAR1Q86SH2 424 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 TMEM75Q8N9X5 138 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 CD28P10747 220 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 RBMY1FQ15415 496 aaKnown RBP7.31□□□□□ -1.24
TTC28-208ENST00000612946 RPP25LQ8N5L8 163 aaKnown RBP7.31□□□□□ -1.24
TTC28-208ENST00000612946 C1orf162Q8NEQ5 155 aaPredicted RBP7.31□□□□□ -1.24
TTC28-208ENST00000612946 EGR1P18146 543 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 GAS1P54826 345 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 TMEM42Q69YG0 159 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 PSG8Q9UQ74 426 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 IGHV5-51A0A0C4DH38 117 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 CD69Q07108 199 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 IGLC7A0M8Q6 106 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 ALKBH6Q3KRA9 238 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 TREML4Q6UXN2 200 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 GTSCR1Q86UQ5 136 aa7.31□□□□□ -1.24
TTC28-208ENST00000612946 SRSF8Q9BRL6 282 aaKnown RBP7.31□□□□□ -1.24
TTC28-208ENST00000612946 PRSS53Q2L4Q9 553 aa7.3□□□□□ -1.24
TTC28-208ENST00000612946 OVOL1O14753 267 aa7.3□□□□□ -1.24
TTC28-208ENST00000612946 C21orf62Q9NYP8 219 aa7.3□□□□□ -1.24
TTC28-208ENST00000612946 CCL2P13500 99 aa7.3□□□□□ -1.24
TTC28-208ENST00000612946 CCDC168Q8NDH2 2452 aa7.3□□□□□ -1.24
TTC28-208ENST00000612946 IGHV3-7P01780 117 aa7.3□□□□□ -1.24
TTC28-208ENST00000612946 PHF7Q9BWX1 381 aaPredicted RBP7.29□□□□□ -1.24
TTC28-208ENST00000612946 DPH3P1Q9H4G8 78 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 RNF125Q96EQ8 232 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 LINC00312Q9Y6C7 94 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 IGKV1-8A0A0C4DH67 115 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 JMJD8Q96S16 334 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 SYNJ2BPP57105 145 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 SCARF2Q96GP6 870 aaPredicted RBP7.29□□□□□ -1.24
TTC28-208ENST00000612946 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
TTC28-208ENST00000612946 C12orf77C9JDV5 145 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 TRAV13-2A0A0B4J235 113 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 NPYP01303 97 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 MYOD1P15172 320 aa7.29□□□□□ -1.24
TTC28-208ENST00000612946 MRPS18CQ9Y3D5 142 aaKnown RBP7.29□□□□□ -1.24
TTC28-208ENST00000612946 HAX1O00165 279 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 GUSBP11Q6P575 273 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 Q6ZVH6 145 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 ATG2AQ2TAZ0 1938 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 ZNF576Q9H609 170 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 TCRAP04437 139 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 CENPVL1A0A0U1RR11 272 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 C17orf98A8MV24 154 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 CEACAM8P31997 349 aaPredicted RBP7.28□□□□□ -1.24
TTC28-208ENST00000612946 UCN2Q96RP3 112 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 LY6G5BQ8NDX9 201 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
TTC28-208ENST00000612946 FZR1Q9UM11 496 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 PATE4P0C8F1 98 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 MRPL23Q16540 153 aaKnown RBP7.28□□□□□ -1.24
TTC28-208ENST00000612946 TMEM171Q8WVE6 324 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 GFI1Q99684 422 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 C15orf53Q8NAA6 179 aa7.28□□□□□ -1.24
TTC28-208ENST00000612946 MBNL3Q9NUK0 354 aaKnown RBP7.28□□□□□ -1.24
TTC28-208ENST00000612946 A0A1W2PRD5 423 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms