RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	HLA-DRB4	P13762	266 aa		13.88	□□□□□ -0.19
CDK11B-205	ENST00000611150	C15orf53	Q8NAA6	179 aa		13.88	□□□□□ -0.19
CDK11B-205	ENST00000611150	SSMEM1	Q8WWF3	244 aa		13.88	□□□□□ -0.19
CDK11B-205	ENST00000611150	HLA-DRB4	X5D2U9	266 aa		13.88	□□□□□ -0.19
CDK11B-205	ENST00000611150	PRR19	A6NJB7	356 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	LINC01548	A6NM66	108 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150		M0R2P5	195 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	KLF17	Q5JT82	389 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	ST8SIA1	Q92185	356 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	LOC107984156	A0A0G2JMH3	177 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150		H3BVH4	76 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	ACTL6B	O94805	426 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	ARL17A	Q8IVW1	177 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	TTTY13	Q9BZ97	58 aa		13.87	□□□□□ -0.19
CDK11B-205	ENST00000611150	WISP1	O95388	367 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	CECR9	P0C854	216 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	OR1C1	Q15619	314 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	C3orf22	Q8N5N4	141 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	IFI27L1	Q96BM0	104 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	RAX	Q9Y2V3	346 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150		A0A0J9YW62	118 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	IGLV2-14	P01704	120 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	FCER1G	P30273	86 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	TMEM52B	Q4KMG9	183 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	FOXL2NB	Q6ZUU3	175 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	FLYWCH2	Q96CP2	140 aa	Known RBP	13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150	PGLYRP4	Q96LB8	373 aa		13.86	□□□□□ -0.19
CDK11B-205	ENST00000611150		J3QLI3	93 aa		13.85	□□□□□ -0.19
CDK11B-205	ENST00000611150	EPDR1	Q9UM22	224 aa		13.85	□□□□□ -0.19
CDK11B-205	ENST00000611150		A0A096LNJ9	63 aa		13.85	□□□□□ -0.19
CDK11B-205	ENST00000611150	PRKN	O60260	465 aa	Predicted RBP	13.85	□□□□□ -0.19
CDK11B-205	ENST00000611150	SRSF2	Q01130	221 aa	Known RBP	13.85	□□□□□ -0.19
CDK11B-205	ENST00000611150	EDDM3A	Q14507	147 aa		13.85	□□□□□ -0.19
CDK11B-205	ENST00000611150	C2orf27A	Q580R0	203 aa		13.85	□□□□□ -0.19
CDK11B-205	ENST00000611150		H0YIG0	161 aa		13.84	□□□□□ -0.19
CDK11B-205	ENST00000611150	MIR17HG	Q75NE6	70 aa		13.84	□□□□□ -0.19
CDK11B-205	ENST00000611150	RPP21	Q9H633	154 aa	Known RBP	13.84	□□□□□ -0.19
CDK11B-205	ENST00000611150	MYMX	A0A1B0GTQ4	84 aa		13.83	□□□□□ -0.19
CDK11B-205	ENST00000611150		P0C879	139 aa		13.83	□□□□□ -0.19
CDK11B-205	ENST00000611150	CT83	Q5H943	113 aa		13.83	□□□□□ -0.19
CDK11B-205	ENST00000611150	DKK2	Q9UBU2	259 aa		13.83	□□□□□ -0.19
CDK11B-205	ENST00000611150	UQCRQ	O14949	82 aa		13.83	□□□□□ -0.2
CDK11B-205	ENST00000611150	ACP1	P24666	158 aa		13.83	□□□□□ -0.2
CDK11B-205	ENST00000611150	PLPPR2	Q96GM1	343 aa		13.83	□□□□□ -0.2
CDK11B-205	ENST00000611150	GFRA4	Q9GZZ7	299 aa		13.83	□□□□□ -0.2
CDK11B-205	ENST00000611150	HBD	P02042	147 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	C8orf88	P0DMB2	117 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	SPINK9	Q5DT21	86 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	LILRA6	Q6PI73	481 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	FAM57A	Q8TBR7	257 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	TRIO	O75962	3097 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	DLX6	P56179	175 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	DAZAP2	Q15038	168 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	RITA1	Q96K30	269 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	ODF3	Q96PU9	254 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	SPANXD	Q9BXN6	97 aa		13.82	□□□□□ -0.2
CDK11B-205	ENST00000611150	C2orf16	Q68DN1	1984 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	TRAV2	A0A0B4J234	112 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	UBE2D3	P61077	147 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	UBE2D2	P62837	147 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	FOXC1	Q12948	553 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	ZFP2	Q6ZN57	461 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	CYB5D2	Q8WUJ1	264 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	TIMD4	Q96H15	378 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	BMF	Q96LC9	184 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	SLC25A2	Q9BXI2	301 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	HHLA3	Q9XRX5	114 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	DYSF	O75923	2080 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	HSPE1	P61604	102 aa	Known RBP	13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	SIGLEC15	Q6ZMC9	328 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	TRPT1	Q86TN4	253 aa	Known RBP	13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	PDPN	Q86YL7	162 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	GJC3	Q8NFK1	279 aa		13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK11B-205	ENST00000611150	TRAV8-4	A0A0B4J246	113 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150		M0R135	149 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	HAX1	O00165	279 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	CRYGD	P07320	174 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	IFI27	P40305	119 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	FBXW4	P57775	412 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	LINC00526	Q96FQ7	95 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	ZNF799	Q96GE5	643 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150		H0YGG7	62 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	HSPB6	O14558	160 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	TMEM196	Q5HYL7	178 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	OR11H6	Q8NGC7	330 aa		13.8	□□□□□ -0.2
CDK11B-205	ENST00000611150	NPIPB11	E5RHQ5	1161 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	NPY	P01303	97 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	HRCT1	Q6UXD1	115 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	RFESD	Q8TAC1	157 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	C7orf69	Q9H7B7	122 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	PRO0628	Q9UI54	55 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	TRBV7-3	A0A075B6L6	115 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	TM4SF5	O14894	197 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	RS1	O15537	224 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	CD7	P09564	240 aa		13.79	□□□□□ -0.2
CDK11B-205	ENST00000611150	PCSK5	Q92824	1860 aa		13.78	□□□□□ -0.2
CDK11B-205	ENST00000611150	LINC01619	G3V211	115 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms