RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 VWFP04275 2813 aa5.66□□□□□ -1.5
CUX2P1-201ENST00000606426 NOTCH3Q9UM47 2321 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 BORCS7-ASMTA0A0B4J1R7 106 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 OR4C46A6NHA9 309 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 HMSDA8MTL9 139 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 BUB3O43684 328 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 COX7A2P2O60397 106 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 RPL11P62913 178 aaKnown RBP5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 PRR20EP86478 221 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 PRR20CP86479 221 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 PRR20DP86480 221 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 PRR20BP86481 221 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 PRR20AP86496 221 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 ZNF345Q14585 488 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 OPCMLQ14982 345 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 GUCA2BQ16661 112 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 Q5BKY6 102 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 C16orf54Q6UWD8 224 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 TCF24Q7RTU0 167 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 AKAP14Q86UN6 197 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 TCTE3Q8IZS6 198 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 TMEM61Q8N0U2 210 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 STPG3Q8N7X2 389 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 ST8SIA2Q92186 375 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 RNF2Q99496 336 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 MFFQ9GZY8 342 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 ARL6Q9H0F7 186 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 SLC39A9Q9NUM3 307 aa5.65□□□□□ -1.5
CUX2P1-201ENST00000606426 CMYA5Q8N3K9 4069 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 A0A0D9SG52 128 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 ZNF785A8K8V0 405 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 G3V3Q6 166 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 DNASE2O00115 360 aaPredicted RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 ARPC5O15511 151 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 JTBO76095 146 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 APOHP02749 345 aaPredicted RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 OR5G3P0C626 314 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 RPL7P18124 248 aaKnown RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 EDN2P20800 178 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 GATA2P23769 480 aaPredicted RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 GALR1P47211 349 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 MEOX2P50222 304 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 KRTAP10-11P60412 298 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 C10orf113Q5VZT2 155 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 FAM90A2PQ658T7 463 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 SIGLEC15Q6ZMC9 328 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 OR8I2Q8N0Y5 310 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 GATAD1Q8WUU5 269 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 GNPNAT1Q96EK6 184 aaPredicted RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 FAM110AQ9BQ89 295 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 SLC25A39Q9BZJ4 359 aaPredicted RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 SMIM3Q9BZL3 60 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 ARV1Q9H2C2 271 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 SEPSECSQ9HD40 501 aaKnown RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 DNAJC4Q9NNZ3 241 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 AURKAIP1Q9NWT8 199 aaPredicted RBP5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 TIMM9Q9Y5J7 89 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 PXMP4Q9Y6I8 212 aa5.64□□□□□ -1.51
CUX2P1-201ENST00000606426 hCG_2014768A0A024R1R8 64 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 IGHV3OR16-13A0A075B7E8 117 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 IGHV3-49A0A0A0MS15 119 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 IGHV3-74A0A0B4J1X5 117 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 IGHV3-66A0A0C4DH42 116 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 RNF222A6NCQ9 220 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 IZUMO1RA6ND01 250 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 ZNF98A6NK75 572 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 H3BRN7 92 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 MBP02144 154 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 C4BPBP20851 252 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 CD81P60033 236 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 EIF5AP63241 154 aaKnown RBP5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 DEFA6Q01524 100 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 MIC13Q5XKP0 118 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 TMEM182Q6ZP80 229 aaPredicted RBP5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 LINC00305Q7Z4B0 112 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 GLMPQ8WWB7 406 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 ST6GAL2Q96JF0 529 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 HYLS1Q96M11 299 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 PRR25Q96S07 402 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 SHANK2-AS3Q9BTD1 123 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 MS4A6AQ9H2W1 248 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 NRN1Q9NPD7 142 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 DOK5Q9P104 306 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 SMAD5-AS1Q9Y6J3 95 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 PKD1L1Q8TDX9 2849 aa5.63□□□□□ -1.51
CUX2P1-201ENST00000606426 KANTRA0A1W2PQU2 76 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 A8MZ25 164 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 C1QBP02746 253 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 ID1P41134 155 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 SNRPD3P62318 126 aaKnown RBP5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 SERF2P84101 59 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 ACOT6Q3I5F7 207 aaPredicted RBP5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 PATE2Q6UY27 113 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 BPIFA4PQ86YQ2 179 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 KCNRGQ8N5I3 272 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 STXBP6Q8NFX7 210 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 OR2G3Q8NGZ4 309 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 MRAPQ8TCY5 172 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 TMEM37Q8WXS4 190 aa5.62□□□□□ -1.51
CUX2P1-201ENST00000606426 ARPC5LQ9BPX5 153 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms