RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CA1P00915 261 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-202ENST00000593764 GATAD1Q8WUU5 269 aa13.52□□□□□ -0.25
SHKBP1-202ENST00000593764 FAM25EA8MYX2 175 aa13.51□□□□□ -0.25
SHKBP1-202ENST00000593764 DLK1P80370 383 aa13.51□□□□□ -0.25
SHKBP1-202ENST00000593764 ARL16Q0P5N6 197 aa13.51□□□□□ -0.25
SHKBP1-202ENST00000593764 ACTL10Q5JWF8 245 aa13.51□□□□□ -0.25
SHKBP1-202ENST00000593764 SMCO3A2RU48 225 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 FNDC10F2Z333 226 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 IL5P05113 134 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 RRAS2P62070 204 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 CYP2G1PQ6ZSU1 146 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 BPIFCQ8NFQ6 507 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 OR10P1Q8NGE3 313 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 C2orf50Q96LR7 162 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 RARRES2Q99969 163 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 C11orf1Q9H5F2 150 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 FBXL17Q9UF56 701 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 SLC45A2Q9UMX9 530 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 RYR2Q92736 4967 aa13.5□□□□□ -0.25
SHKBP1-202ENST00000593764 C5orf51A6NDU8 294 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 ZNF98A6NK75 572 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 K7EPK0 472 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 SOCS3O14543 225 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 ORM2P19652 201 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 IL15RAQ13261 267 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 GSG1LQ6UXU4 331 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 OR8I2Q8N0Y5 310 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 PPP1R14BQ96C90 147 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 C17orf77Q96MU5 243 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 NPVFQ9HCQ7 196 aa13.49□□□□□ -0.25
SHKBP1-202ENST00000593764 PLECQ15149 4684 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-202ENST00000593764 SPP1P10451 314 aa13.48□□□□□ -0.25
SHKBP1-202ENST00000593764 ATF4P18848 351 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-202ENST00000593764 C4BPBP20851 252 aa13.48□□□□□ -0.25
SHKBP1-202ENST00000593764 OR1B1Q8NGR6 318 aa13.48□□□□□ -0.25
SHKBP1-202ENST00000593764 BATF3Q9NR55 127 aa13.48□□□□□ -0.25
SHKBP1-202ENST00000593764 LSM5Q9Y4Y9 91 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-202ENST00000593764 LCE6AA0A183 80 aa13.47□□□□□ -0.25
SHKBP1-202ENST00000593764 H3BMM0 161 aa13.47□□□□□ -0.25
SHKBP1-202ENST00000593764 PLP1P60201 277 aa13.47□□□□□ -0.25
SHKBP1-202ENST00000593764 MORN3Q6PF18 240 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-202ENST00000593764 ENKURQ8TC29 256 aa13.47□□□□□ -0.25
SHKBP1-202ENST00000593764 SLC25A32Q9H2D1 315 aa13.47□□□□□ -0.25
SHKBP1-202ENST00000593764 DNAH1Q9P2D7 4330 aa13.47□□□□□ -0.25
SHKBP1-202ENST00000593764 DEDDO75618 318 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 DEFB1P60022 68 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 SELENOTP62341 195 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 NRARPQ7Z6K4 114 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 CSNK1G2-AS1Q8NCQ2 148 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 TMEM147Q9BVK8 224 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 GGACTQ9BVM4 153 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 SLC25A22Q9H936 323 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 MGAT4CQ9UBM8 478 aa13.46□□□□□ -0.25
SHKBP1-202ENST00000593764 L7N2F9 121 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 PSMB3P49720 205 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 VAMP2P63027 116 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 TMEM41BQ5BJD5 291 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 GDF5OSQ5U4N7 250 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 TEPPQ6URK8 271 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 LINC00052Q96N35 136 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 SLC25A39Q9BZJ4 359 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 DOK5Q9P104 306 aa13.45□□□□□ -0.26
SHKBP1-202ENST00000593764 FAM24AA6NFZ4 105 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 H3BRN7 92 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 ISLRO14498 428 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 LINC00869P0C866 280 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 HLA-DRB4P13762 266 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 ID1P41134 155 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 GALR1P47211 349 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 SLC38A11Q08AI6 406 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 RAB32Q13637 225 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 PATE2Q6UY27 113 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 SHANK2-AS3Q9BTD1 123 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 RSG1Q9BU20 258 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 SCRT1Q9BWW7 348 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 C11orf68Q9H3H3 251 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 HLA-DRB4X5D2U9 266 aa13.44□□□□□ -0.26
SHKBP1-202ENST00000593764 HYPMO75409 117 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 CST7O76096 145 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 BCAP31P51572 246 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 CAV2P51636 162 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 PMS2P11Q13670 270 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 TMEM217Q8N7C4 229 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 C20orf173Q96LM9 149 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 GPR82Q96P67 336 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 SAV1Q9H4B6 383 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 CLEC5AQ9NY25 188 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 HIGD1AQ9Y241 93 aa13.43□□□□□ -0.26
SHKBP1-202ENST00000593764 CXorf65A6NEN9 183 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 ZNF705EA8MWA4 302 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 INMT-MINDY4F8WBC2 141 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 AGPAT2O15120 278 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 DEFB4AO15263 64 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 MEOX2P50222 304 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 S100A10P60903 97 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 Q8NAQ8 132 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 UHRF2Q96PU4 802 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms