RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 PSMB3P49720 205 aa11.31□□□□□ -0.6
SF3B3-215ENST00000577085 NANOS2P60321 138 aaKnown RBP11.31□□□□□ -0.6
SF3B3-215ENST00000577085 ZNF846Q147U1 533 aa11.31□□□□□ -0.6
SF3B3-215ENST00000577085 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
SF3B3-215ENST00000577085 OR1B1Q8NGR6 318 aa11.31□□□□□ -0.6
SF3B3-215ENST00000577085 SMIM8Q96KF7 97 aa11.31□□□□□ -0.6
SF3B3-215ENST00000577085 TBC1D24Q9ULP9 559 aa11.31□□□□□ -0.6
SF3B3-215ENST00000577085 LYSTQ99698 3801 aa11.31□□□□□ -0.6
SF3B3-215ENST00000577085 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
SF3B3-215ENST00000577085 IL5P05113 134 aa11.3□□□□□ -0.6
SF3B3-215ENST00000577085 MITD1Q8WV92 249 aa11.3□□□□□ -0.6
SF3B3-215ENST00000577085 LINC00476Q8WZB0 136 aa11.3□□□□□ -0.6
SF3B3-215ENST00000577085 MGAT4CQ9UBM8 478 aa11.3□□□□□ -0.6
SF3B3-215ENST00000577085 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
SF3B3-215ENST00000577085 TRAV6A0A075B6T7 132 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 FAM25EA8MYX2 175 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 H3BMM0 161 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 GIG44P09565 113 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-215ENST00000577085 HLA-DRB4P13762 266 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 MEOX2P50222 304 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 RRAS2P62070 204 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-215ENST00000577085 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 TMEM144Q7Z5S9 345 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 S100A7AQ86SG5 101 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 OR10P1Q8NGE3 313 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 C16orf92Q96LL3 132 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 CCDC32Q9BV29 185 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 WDR12Q9GZL7 423 aaKnown RBP11.29□□□□□ -0.6
SF3B3-215ENST00000577085 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 HLA-DRB4X5D2U9 266 aa11.29□□□□□ -0.6
SF3B3-215ENST00000577085 IGHV4-28A0A0C4DH34 117 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 L7N2F9 121 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 ISLRO14498 428 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 PLA2G10O15496 165 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 TCRBP04435 133 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 METTL15P1P0C7V9 234 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 GATA2P23769 480 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-215ENST00000577085 RAP2BP61225 183 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 VAMP2P63027 116 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 ZBTB8BQ8NAP8 495 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-215ENST00000577085 Q8NAQ8 132 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 GPR82Q96P67 336 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
SF3B3-215ENST00000577085 C5orf51A6NDU8 294 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 TSC22D2O75157 780 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 TAS2R30P59541 319 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 SELENOTP62341 195 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 SPATA31B1PQ5VZV4 182 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 C2CD4CQ8TF44 421 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 SLC25A32Q9H2D1 315 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-215ENST00000577085 RPRMQ9NS64 109 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 DOK5Q9P104 306 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
SF3B3-215ENST00000577085 FAM240BA0A1B0GVZ2 78 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-215ENST00000577085 HYPMO75409 117 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 OR5G3P0C626 314 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 LINC00869P0C866 280 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 BCAP31P51572 246 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 DLK1P80370 383 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 FGL1Q08830 312 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 MZT2BQ6NZ67 158 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 S100ZQ8WXG8 99 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 HRH4Q9H3N8 390 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 NPVFQ9HCQ7 196 aa11.26□□□□□ -0.61
SF3B3-215ENST00000577085 C11orf94C9JXX5 98 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 CCSO14618 274 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 H2AFB2P0C5Z0 115 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 PAX9P55771 341 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 TEPPQ6URK8 271 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 TMEM14EPQ6UXP3 125 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-215ENST00000577085 CSNK1G2-AS1Q8NCQ2 148 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 ZNF431Q8TF32 576 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-215ENST00000577085 RNF24Q9Y225 148 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 X6R8D5 127 aa11.25□□□□□ -0.61
SF3B3-215ENST00000577085 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 SOCS3O14543 225 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 GOSR2O14653 212 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 MBPP02686 304 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-215ENST00000577085 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
SF3B3-215ENST00000577085 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 PVALBP20472 110 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-215ENST00000577085 FXYD7P58549 80 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 DEFB1P60022 68 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
SF3B3-215ENST00000577085 LINC00299Q6ZSB3 139 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 SEC22CQ9BRL7 303 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 SCRT1Q9BWW7 348 aa11.24□□□□□ -0.61
SF3B3-215ENST00000577085 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-215ENST00000577085 ARL6Q9H0F7 186 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms