RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 PXDC1Q5TGL8 231 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 MIC13Q5XKP0 118 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 TCTE3Q8IZS6 198 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 STPG3Q8N7X2 389 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 RNF2Q99496 336 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 NPCDR1Q9BY65 106 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 WFDC1Q9HC57 220 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 HIGD1AQ9Y241 93 aa10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-218ENST00000574964 IGKV3-7A0A075B6H7 116 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 TRAV25A0A0B4J276 109 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 HMSDA8MTL9 139 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 COX7A2P2O60397 106 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 CD5P06127 495 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 GP9P14770 177 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 RPL29P47914 159 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 EGFEM1PQ0D2K5 195 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 TCF24Q7RTU0 167 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 TMEM61Q8N0U2 210 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 VSIRQ9H7M9 311 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 SLC39A9Q9NUM3 307 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 PXMP4Q9Y6I8 212 aa10.96□□□□□ -0.65
NPLOC4-218ENST00000574964 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 PLP1P60201 277 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 KRTAP10-11P60412 298 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 PAFAH1B2P68402 229 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 OR11H4Q8NGC9 324 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 NEURL2Q9BR09 285 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 U3KQE9 123 aa10.95□□□□□ -0.66
NPLOC4-218ENST00000574964 CMYA5Q8N3K9 4069 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 NOTCH1P46531 2555 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 HELTA6NFD8 242 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 TAAR5O14804 337 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 BUB3O43684 328 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PRR20EP86478 221 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PRR20CP86479 221 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PRR20DP86480 221 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PRR20BP86481 221 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PRR20AP86496 221 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 KPRPQ5T749 579 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 C10orf113Q5VZT2 155 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 C16orf54Q6UWD8 224 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 OR8I2Q8N0Y5 310 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PRR25Q96S07 402 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PFDN5Q99471 154 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 RSG1Q9BU20 258 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 SLC25A22Q9H936 323 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 DNAJC4Q9NNZ3 241 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 RNF24Q9Y225 148 aa10.94□□□□□ -0.66
NPLOC4-218ENST00000574964 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 A0A0D9SG52 128 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 KANTRA0A1W2PQU2 76 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 ZNF98A6NK75 572 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 DNASE2O00115 360 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 TSPAN4O14817 238 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 C1QBP02746 253 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 TFPI2P48307 235 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 ZNF345Q14585 488 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 GTSCR1Q86UQ5 136 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 WFDC3Q8IUB2 231 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 GBGT1Q8N5D6 347 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 KCNRGQ8N5I3 272 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 HSD17B11Q8NBQ5 300 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 HYLS1Q96M11 299 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 UHRF2Q96PU4 802 aa10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-218ENST00000574964 OR4C46A6NHA9 309 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 ZNF785A8K8V0 405 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 PFDN1O60925 122 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 PRB2P02812 416 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 FFAR4Q5NUL3 377 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 C1orf194Q5T5A4 169 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 RPL7L1Q6DKI1 246 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 PATE2Q6UY27 113 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 LINC00305Q7Z4B0 112 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 STXBP6Q8NFX7 210 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 GLMPQ8WWB7 406 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 ARPC5LQ9BPX5 153 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 SCRT1Q9BWW7 348 aa10.92□□□□□ -0.66
NPLOC4-218ENST00000574964 H3BRN7 92 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 JTBO76095 146 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 GALR1P47211 349 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 ZFP69Q49AA0 526 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 FAM90A2PQ658T7 463 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 GATAD1Q8WUU5 269 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 TMEM37Q8WXS4 190 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 TIMM9Q9Y5J7 89 aa10.91□□□□□ -0.66
NPLOC4-218ENST00000574964 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-218ENST00000574964 CXCL2P19875 107 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms