RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 GNPNAT1Q96EK6 184 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-222ENST00000570139 ATP5SQ99766 215 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 KCNIP2Q9NS61 270 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 SIGLEC8Q9NYZ4 499 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 MLXQ9UH92 298 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 PITPNC1Q9UKF7 332 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 SIGLEC9Q9Y336 463 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 PYGO1Q9Y3Y4 419 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 HILPDAQ9Y5L2 63 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 MALRD1Q5VYJ5 2156 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 APCP25054 2843 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 TRAV40A0A0B4J280 105 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 TEX50A0A1B0GTY4 177 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 IGSF23A1L1A6 192 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 SMCO3A2RU48 225 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 FAM24AA6NFZ4 105 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 M0QZK8 103 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 RS1O15537 224 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 FGF16O43320 207 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 MPDU1O75352 247 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 TMEM50AO95807 157 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 IFNA10P01566 189 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 IGKV1D-33P01593 117 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 IGKV1-33P01594 117 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 SEC11BP0C7V7 166 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 IAPPP10997 89 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 NPY1RP25929 384 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 SNCAP37840 140 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 VDAC2P45880 294 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-222ENST00000570139 RPL27AP46776 148 aaKnown RBP5.45□□□□□ -1.54
CNOT1-222ENST00000570139 RAB5CP51148 216 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 IFITM2Q01629 132 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 SLC38A11Q08AI6 406 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 HES1Q14469 280 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 LAGE3Q14657 143 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 PLGLAQ15195 96 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 MMDQ15546 238 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 PRSS8Q16651 343 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 C2orf83Q53S99 150 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 CYB5R2Q6BCY4 276 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 PVRIGQ6DKI7 326 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 Q8N6K4 173 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 OR5C1Q8NGR4 320 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 GINS3Q9BRX5 216 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 TMEM147Q9BVK8 224 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 ARV1Q9H2C2 271 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 ZNF430Q9H8G1 570 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-222ENST00000570139 NDUFA4L2Q9NRX3 87 aa5.45□□□□□ -1.54
CNOT1-222ENST00000570139 METTL1Q9UBP6 276 aaKnown RBP5.45□□□□□ -1.54
CNOT1-222ENST00000570139 UMAD1C9J7I0 102 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 H3BP45 60 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 K7EQG2 157 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 DLX1P56177 255 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 C5orf64Q2M2E5 130 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 LRRC75BQ2VPJ9 315 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 BSXQ3C1V8 233 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 CLLU1Q5K131 121 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 LDLRAD2Q5SZI1 272 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 DPPA3Q6W0C5 159 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 BPIFCQ8NFQ6 507 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 SCGB1C1Q8TD33 95 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 RNASEH2CQ8TDP1 164 aaKnown RBP5.44□□□□□ -1.54
CNOT1-222ENST00000570139 C9orf85Q96MD7 179 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 PSMG3Q9BT73 122 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-222ENST00000570139 OCR1Q9BZK8 76 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 CYTL1Q9NRR1 136 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 UQCC1Q9NVA1 299 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 TIMM9Q9Y5J7 89 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 USF3Q68DE3 2245 aa5.44□□□□□ -1.54
CNOT1-222ENST00000570139 SPTAN1Q13813 2472 aaKnown RBP5.43□□□□□ -1.54
CNOT1-222ENST00000570139 IGHV3OR16-12A0A075B7B8 117 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 IGHV3-72A0A0B4J1Y9 119 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 TRAV3A0A0B4J244 114 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 TEX48A0A1B0GUV7 120 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 C17orf112F2Z3M2 114 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 KCNAB3O43448 404 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 CST7O76096 145 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 IGLV2-11P01706 119 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 IGHG4P01861 327 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 HLA-DRB1P01911 266 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 METTL15P1P0C7V9 234 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 GPX4P36969 197 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-222ENST00000570139 SERF2P84101 59 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 TMEM267Q0VDI3 215 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-222ENST00000570139 RAB31Q13636 194 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 TNXAQ16473 311 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 RPL7L1Q6DKI1 246 aaKnown RBP5.43□□□□□ -1.54
CNOT1-222ENST00000570139 PDZD9Q8IXQ8 264 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 MTURNQ8N3F0 131 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 ZNF491Q8N8L2 437 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 C11orf45Q8TAV5 145 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 SRSF12Q8WXF0 261 aaKnown RBP5.43□□□□□ -1.54
CNOT1-222ENST00000570139 CACNG8Q8WXS5 425 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 C22orf15Q8WYQ4 148 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 TAF15Q92804 592 aaKnown RBP eCLIP5.43□□□□□ -1.54
CNOT1-222ENST00000570139 OR4C12Q96R67 309 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 RASL11BQ9BPW5 248 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 HINT2Q9BX68 163 aa5.43□□□□□ -1.54
CNOT1-222ENST00000570139 MOB4Q9Y3A3 225 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms