RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-222	ENST00000568444	BMI1	P35226	326 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	EIF5A	P63241	154 aa	Known RBP	10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	PRR31	Q5SQ13	230 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	PXDC1	Q5TGL8	231 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	LAMTOR1	Q6IAA8	161 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	OR1L4	Q8NGR5	311 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	MARC2	Q969Z3	335 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	MCRIP2	Q9BUT9	160 aa	Known RBP	10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	SH3BGRL3	Q9H299	93 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	ARV1	Q9H2C2	271 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	MRPL27	Q9P0M9	148 aa	Known RBP	10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	TIMM9	Q9Y5J7	89 aa		10.85	□□□□□ -0.67
KLHDC4-222	ENST00000568444	APOH	P02749	345 aa	Predicted RBP	10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	TPT1	P13693	172 aa	Known RBP	10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	IGLL1	P15814	213 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	CRYBB3	P26998	211 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	S100A7	P31151	101 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	PLP1	P60201	277 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	C9orf66	Q5T8R8	295 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	C10orf113	Q5VZT2	155 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	IL34	Q6ZMJ4	242 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	S100A7A	Q86SG5	101 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	WFDC9	Q8NEX5	89 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	ST8SIA2	Q92186	375 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	UHRF2	Q96PU4	802 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	PFDN5	Q99471	154 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	PSMG3	Q9BT73	122 aa	Predicted RBP	10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	SLC25A32	Q9H2D1	315 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	TMEM231	Q9H6L2	316 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	SMPX	Q9UHP9	88 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	PFDN2	Q9UHV9	154 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	SELENOK	Q9Y6D0	94 aa		10.84	□□□□□ -0.67
KLHDC4-222	ENST00000568444	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444		A0A1W2PS18	150 aa		10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444	OR2G3	Q8NGZ4	309 aa		10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444	GRAMD2B	Q96HH9	432 aa		10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444	RHPN1-AS1	Q9BWJ2	59 aa		10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SLC25A22	Q9H936	323 aa		10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444	DNAJC4	Q9NNZ3	241 aa		10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444	BOLA1	Q9Y3E2	137 aa		10.83	□□□□□ -0.68
KLHDC4-222	ENST00000568444	CMYA5	Q8N3K9	4069 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	CHEK1	O14757	476 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	C8orf88	P0DMB2	117 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	GCSAML	Q5JQS6	135 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	PATE2	Q6UY27	113 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	ADAMTSL5	Q6ZMM2	481 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	LINC00305	Q7Z4B0	112 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SLC51B	Q86UW2	128 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	BAP18	Q8IXM2	172 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	TMEM37	Q8WXS4	190 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SCRT1	Q9BWW7	348 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SIGLEC8	Q9NYZ4	499 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	MLX	Q9UH92	298 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444	TRRAP	Q9Y4A5	3859 aa		10.82	□□□□□ -0.68
KLHDC4-222	ENST00000568444		H3BRN7	92 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	INSL3	P51460	131 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SERF2	P84101	59 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	FAM78B	Q5VT40	261 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	LEMD1	Q68G75	181 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	STOML3	Q8TAV4	291 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	GATAD1	Q8WUU5	269 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	GPR61	Q9BZJ8	451 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	VWF	P04275	2813 aa		10.81	□□□□□ -0.68
KLHDC4-222	ENST00000568444	ZNF98	A6NK75	572 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	BUB3	O43684	328 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	MB	P02144	154 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SPP1	P10451	314 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	M6PR	P20645	277 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	RAB2A	P61019	212 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	RPL11	P62913	178 aa	Known RBP	10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	AKR1C8P	Q5T2L2	129 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	FAM122C	Q6P4D5	195 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	C16orf54	Q6UWD8	224 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	OR10G4	Q8NGN3	311 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	OR10G9	Q8NGN4	311 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	OR10G7	Q8NGN6	311 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	RNF2	Q99496	336 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SHANK2-AS3	Q9BTD1	123 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	VSIR	Q9H7M9	311 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	TECR	Q9NZ01	308 aa	Known RBP	10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444		U3KQE9	123 aa		10.8	□□□□□ -0.68
KLHDC4-222	ENST00000568444	IGKV3-7	A0A075B6H7	116 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	IGLV1-51	P01701	117 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	RHOB	P62745	196 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	DEFB114	Q30KQ6	69 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	CD300E	Q496F6	205 aa	Predicted RBP	10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	TMEM41B	Q5BJD5	291 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	OXLD1	Q5BKU9	147 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	TCF24	Q7RTU0	167 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	OR8I2	Q8N0Y5	310 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	TMED6	Q8WW62	240 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444	RNF24	Q9Y225	148 aa		10.79	□□□□□ -0.68
KLHDC4-222	ENST00000568444		A0A1W2PPV4	95 aa		10.78	□□□□□ -0.68
KLHDC4-222	ENST00000568444	SEC11B	P0C7V7	166 aa		10.78	□□□□□ -0.68
KLHDC4-222	ENST00000568444	C1orf194	Q5T5A4	169 aa		10.78	□□□□□ -0.68
KLHDC4-222	ENST00000568444	MORN5	Q5VZ52	161 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms