RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 OR51G1Q8NGK1 321 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 ACY3Q96HD9 319 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 RAB40CQ96S21 281 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 KNCNA6PVL3 124 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 S100A7P31151 101 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 ID1P41134 155 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 SMCO1Q147U7 214 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 NMSQ5H8A3 153 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 LGI3Q8N145 548 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 LHFPL5Q8TAF8 219 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 DTD1Q8TEA8 209 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 NPIPB3Q92617 1050 aa13.53□□□□□ -0.24
LINC01238-205ENST00000567549 GOSR2O14653 212 aa13.52□□□□□ -0.25
LINC01238-205ENST00000567549 DEDDO75618 318 aa13.52□□□□□ -0.25
LINC01238-205ENST00000567549 HLA-DMBP28068 263 aa13.52□□□□□ -0.25
LINC01238-205ENST00000567549 SUPT4H1P63272 117 aaKnown RBP13.52□□□□□ -0.25
LINC01238-205ENST00000567549 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
LINC01238-205ENST00000567549 TEX48A0A1B0GUV7 120 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 DUXBA0A1W2PPF3 345 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 ZFP92A6NM28 416 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 FAM90A26D6RGX4 464 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 BUB3O43684 328 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
LINC01238-205ENST00000567549 RAB11AP62491 216 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 RNF125Q96EQ8 232 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 HYLS1Q96M11 299 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 RNF126Q9BV68 326 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 HSPB7Q9UBY9 170 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 AGRNO00468 2067 aa13.51□□□□□ -0.25
LINC01238-205ENST00000567549 C4BPBP20851 252 aa13.5□□□□□ -0.25
LINC01238-205ENST00000567549 GPX4P36969 197 aaPredicted RBP13.5□□□□□ -0.25
LINC01238-205ENST00000567549 RPP30P78346 268 aaKnown RBP13.5□□□□□ -0.25
LINC01238-205ENST00000567549 CYCSP99999 105 aaKnown RBP13.5□□□□□ -0.25
LINC01238-205ENST00000567549 USF2Q15853 346 aaPredicted RBP13.5□□□□□ -0.25
LINC01238-205ENST00000567549 C1orf194Q5T5A4 169 aa13.5□□□□□ -0.25
LINC01238-205ENST00000567549 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
LINC01238-205ENST00000567549 OR1S1Q8NH92 325 aa13.5□□□□□ -0.25
LINC01238-205ENST00000567549 CFDP00746 253 aaPredicted RBP13.49□□□□□ -0.25
LINC01238-205ENST00000567549 PSG1P11464 419 aa13.49□□□□□ -0.25
LINC01238-205ENST00000567549 GSG1LQ6UXU4 331 aa13.49□□□□□ -0.25
LINC01238-205ENST00000567549 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
LINC01238-205ENST00000567549 PBDC1Q9BVG4 233 aa13.49□□□□□ -0.25
LINC01238-205ENST00000567549 APLNQ9ULZ1 77 aa13.49□□□□□ -0.25
LINC01238-205ENST00000567549 X6R8D5 127 aa13.49□□□□□ -0.25
LINC01238-205ENST00000567549 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 MED6O75586 246 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 NXPH3O95157 252 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 IFNA21P01568 189 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 GIG44P09565 113 aaPredicted RBP13.48□□□□□ -0.25
LINC01238-205ENST00000567549 RBMY1A1P0DJD3 496 aaKnown RBP13.48□□□□□ -0.25
LINC01238-205ENST00000567549 RBMY1CP0DJD4 496 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 HLA-DRB4P13762 266 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 FGL1Q08830 312 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
LINC01238-205ENST00000567549 OR2T35Q8NGX2 323 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 HLA-DRB4X5D2U9 266 aa13.48□□□□□ -0.25
LINC01238-205ENST00000567549 IGHV4-4A0A075B6R2 117 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 H3BMM0 161 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 P0DMU3 169 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 PSMB3P49720 205 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 MEOX2P50222 304 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 H2BFSP57053 126 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 Q6ZTC4 211 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 CSNK1G2-AS1Q8NCQ2 148 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 CIB3Q96Q77 187 aaPredicted RBP13.47□□□□□ -0.25
LINC01238-205ENST00000567549 NEU1Q99519 415 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 RBKSQ9H477 322 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 CLEC5AQ9NY25 188 aa13.47□□□□□ -0.25
LINC01238-205ENST00000567549 C5orf51A6NDU8 294 aa13.46□□□□□ -0.25
LINC01238-205ENST00000567549 SIX6O95475 246 aa13.46□□□□□ -0.25
LINC01238-205ENST00000567549 NDUFAF3Q9BU61 184 aa13.46□□□□□ -0.25
LINC01238-205ENST00000567549 XCL2Q9UBD3 114 aa13.46□□□□□ -0.25
LINC01238-205ENST00000567549 DEFB131BA0A096LNP1 70 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 FAM25EA8MYX2 175 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 AMBPP02760 352 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 SLC25A6P12236 298 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 GGNBP1Q5YKI7 109 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 FOXI2Q6ZQN5 318 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 LINC00336Q6ZUF6 198 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 LYZL2Q7Z4W2 148 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 TMEM170AQ8WVE7 144 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 C2orf50Q96LR7 162 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 CLUHP3Q96NS8 147 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 NMES1Q9C002 83 aa13.45□□□□□ -0.26
LINC01238-205ENST00000567549 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
LINC01238-205ENST00000567549 SMLR1H3BR10 107 aa13.44□□□□□ -0.26
LINC01238-205ENST00000567549 SPART-AS1P0CW21 52 aa13.44□□□□□ -0.26
LINC01238-205ENST00000567549 GAMTQ14353 236 aa13.44□□□□□ -0.26
LINC01238-205ENST00000567549 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
LINC01238-205ENST00000567549 OR8I2Q8N0Y5 310 aa13.44□□□□□ -0.26
LINC01238-205ENST00000567549 TMED3Q9Y3Q3 217 aa13.44□□□□□ -0.26
LINC01238-205ENST00000567549 ISLRO14498 428 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 HOXB5P09067 269 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 LYZP61626 148 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 S100A7AQ86SG5 101 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 FAM210BQ96KR6 192 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms