RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 EPPK1P58107 5090 aaKnown RBP12.62□□□□□ -0.39
CLN6-208ENST00000567060 ELOA3CA0A087WX78 387 aaPredicted RBP12.61□□□□□ -0.39
CLN6-208ENST00000567060 TAAR5O14804 337 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 OR2F1Q13607 317 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 OPCMLQ14982 345 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 CD300EQ496F6 205 aaPredicted RBP12.61□□□□□ -0.39
CLN6-208ENST00000567060 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 RBPMS2Q6ZRY4 209 aaKnown RBP12.61□□□□□ -0.39
CLN6-208ENST00000567060 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 ZNF709Q8N972 641 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 SCGB1C1Q8TD33 95 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 ST6GAL2Q96JF0 529 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 WWC2-AS2Q96NR7 200 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 PBDC1Q9BVG4 233 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 GGTLC1Q9BX51 225 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 NPCDR1Q9BY65 106 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 MLXQ9UH92 298 aa12.61□□□□□ -0.39
CLN6-208ENST00000567060 ZNF256Q9Y2P7 627 aaPredicted RBP12.61□□□□□ -0.39
CLN6-208ENST00000567060 IGHV3OR16-8A0A075B7F1 116 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 RNF222A6NCQ9 220 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 HELTA6NFD8 242 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 TSPAN4O14817 238 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 ZNF207O43670 478 aaKnown RBP12.6□□□□□ -0.39
CLN6-208ENST00000567060 BUB3O43684 328 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 HYPMO75409 117 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 PRR20EP86478 221 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 PRR20CP86479 221 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 PRR20DP86480 221 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 PRR20BP86481 221 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 PRR20AP86496 221 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 GPR82Q96P67 336 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 PFDN5Q99471 154 aa12.6□□□□□ -0.39
CLN6-208ENST00000567060 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
CLN6-208ENST00000567060 TRAV2A0A0B4J234 112 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 B2MP61769 119 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 FAM90A2PQ658T7 463 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 C16orf54Q6UWD8 224 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 OR1L4Q8NGR5 311 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 MFFQ9GZY8 342 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 HIGD1AQ9Y241 93 aa12.59□□□□□ -0.39
CLN6-208ENST00000567060 A0A0D9SG52 128 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 ARPC5O15511 151 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 TMEM182Q6ZP80 229 aaPredicted RBP12.58□□□□□ -0.4
CLN6-208ENST00000567060 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 OR1B1Q8NGR6 318 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 GATAD1Q8WUU5 269 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 ST8SIA2Q92186 375 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 SLC39A9Q9NUM3 307 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 TIMM9Q9Y5J7 89 aa12.58□□□□□ -0.4
CLN6-208ENST00000567060 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 hCG_2014768A0A024R1R8 64 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 BORCS7-ASMTA0A0B4J1R7 106 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 JTBO76095 146 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 C1QBP02746 253 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 GP9P14770 177 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 ORM2P19652 201 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 EDN2P20800 178 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 GATA2P23769 480 aaPredicted RBP12.57□□□□□ -0.4
CLN6-208ENST00000567060 CMC4P56277 68 aaPredicted RBP12.57□□□□□ -0.4
CLN6-208ENST00000567060 SAMD13Q5VXD3 122 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 PPP1R14BQ96C90 147 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 HYLS1Q96M11 299 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 RNF2Q99496 336 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 SMIM3Q9BZL3 60 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 ARL6Q9H0F7 186 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 PXMP4Q9Y6I8 212 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 BIRC6Q9NR09 4857 aa12.57□□□□□ -0.4
CLN6-208ENST00000567060 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 H3BRN7 92 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 OR5G3P0C626 314 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 TCF24Q7RTU0 167 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 GTSCR1Q86UQ5 136 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 KCNRGQ8N5I3 272 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 FAM110AQ9BQ89 295 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 SHANK2-AS3Q9BTD1 123 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 SLC25A39Q9BZJ4 359 aaPredicted RBP12.56□□□□□ -0.4
CLN6-208ENST00000567060 ARV1Q9H2C2 271 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 DNAJC4Q9NNZ3 241 aa12.56□□□□□ -0.4
CLN6-208ENST00000567060 ZNF98A6NK75 572 aa12.55□□□□□ -0.4
CLN6-208ENST00000567060 ZNF785A8K8V0 405 aa12.55□□□□□ -0.4
CLN6-208ENST00000567060 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
CLN6-208ENST00000567060 COX7A2P2O60397 106 aa12.55□□□□□ -0.4
CLN6-208ENST00000567060 APOHP02749 345 aaPredicted RBP12.55□□□□□ -0.4
CLN6-208ENST00000567060 GNPNAT1Q96EK6 184 aaPredicted RBP12.55□□□□□ -0.4
CLN6-208ENST00000567060 B9D2Q9BPU9 175 aa12.55□□□□□ -0.4
CLN6-208ENST00000567060 PSMG3Q9BT73 122 aaPredicted RBP12.55□□□□□ -0.4
CLN6-208ENST00000567060 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
CLN6-208ENST00000567060 SEPSECSQ9HD40 501 aaKnown RBP12.55□□□□□ -0.4
CLN6-208ENST00000567060 HUWE1Q7Z6Z7 4374 aaKnown RBP12.55□□□□□ -0.4
CLN6-208ENST00000567060 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
CLN6-208ENST00000567060 RPL7P18124 248 aaKnown RBP12.54□□□□□ -0.4
CLN6-208ENST00000567060 MEOX2P50222 304 aa12.54□□□□□ -0.4
CLN6-208ENST00000567060 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
CLN6-208ENST00000567060 C10orf113Q5VZT2 155 aa12.54□□□□□ -0.4
CLN6-208ENST00000567060 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms