RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 CYTL1Q9NRR1 136 aa11.91□□□□□ -0.5
SPG7-204ENST00000561911 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
SPG7-204ENST00000561911 DOK5Q9P104 306 aa11.91□□□□□ -0.5
SPG7-204ENST00000561911 U3KQE9 123 aa11.91□□□□□ -0.5
SPG7-204ENST00000561911 BCL2L11O43521 198 aa11.9□□□□□ -0.5
SPG7-204ENST00000561911 HYPMO75409 117 aa11.9□□□□□ -0.5
SPG7-204ENST00000561911 APOHP02749 345 aaPredicted RBP11.9□□□□□ -0.5
SPG7-204ENST00000561911 BMI1P35226 326 aa11.9□□□□□ -0.5
SPG7-204ENST00000561911 LGALSLQ3ZCW2 172 aaPredicted RBP11.9□□□□□ -0.5
SPG7-204ENST00000561911 Q6ZRG5 221 aa11.9□□□□□ -0.5
SPG7-204ENST00000561911 HSD17B11Q8NBQ5 300 aa11.9□□□□□ -0.5
SPG7-204ENST00000561911 VSIRQ9H7M9 311 aa11.9□□□□□ -0.5
SPG7-204ENST00000561911 CMYA5Q8N3K9 4069 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 CHEK1O14757 476 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 WIPF1O43516 503 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 COX7A2P2O60397 106 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 JTBO76095 146 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 IGLV1-51P01701 117 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 OR5G3P0C626 314 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 OXLD1Q5BKU9 147 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 C9orf62Q8N4C0 152 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 PPP1R14BQ96C90 147 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
SPG7-204ENST00000561911 MLXQ9UH92 298 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 HIGD1AQ9Y241 93 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
SPG7-204ENST00000561911 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 A0A1W2PS18 150 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 ATP6V0CP27449 155 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 GRAMD2BQ96HH9 432 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 ARV1Q9H2C2 271 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
SPG7-204ENST00000561911 ELOA3CA0A087WX78 387 aaPredicted RBP11.87□□□□□ -0.51
SPG7-204ENST00000561911 BUB3O43684 328 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 S100A7P31151 101 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 CD300EQ496F6 205 aaPredicted RBP11.87□□□□□ -0.51
SPG7-204ENST00000561911 SAMD5Q5TGI4 173 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 LAMTOR1Q6IAA8 161 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 S100A7AQ86SG5 101 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 OR1L4Q8NGR5 311 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 GNPNAT1Q96EK6 184 aaPredicted RBP11.87□□□□□ -0.51
SPG7-204ENST00000561911 PFDN5Q99471 154 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 RNF2Q99496 336 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 PSMG3Q9BT73 122 aaPredicted RBP11.87□□□□□ -0.51
SPG7-204ENST00000561911 SHANK2-AS3Q9BTD1 123 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 ZNF471Q9BX82 626 aaPredicted RBP11.87□□□□□ -0.51
SPG7-204ENST00000561911 DNAJC4Q9NNZ3 241 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 RFNGQ9Y644 331 aa11.87□□□□□ -0.51
SPG7-204ENST00000561911 G3V4G9 280 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 H3BRN7 92 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
SPG7-204ENST00000561911 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 FFAR4Q5NUL3 377 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 OR2K2Q8NGT1 345 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 UHRF2Q96PU4 802 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 SCRT1Q9BWW7 348 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 SLC25A39Q9BZJ4 359 aaPredicted RBP11.86□□□□□ -0.51
SPG7-204ENST00000561911 NOTCH1P46531 2555 aa11.86□□□□□ -0.51
SPG7-204ENST00000561911 ZNF98A6NK75 572 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 C1orf194Q5T5A4 169 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 TCF24Q7RTU0 167 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 OR2G3Q8NGZ4 309 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 GLMPQ8WWB7 406 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 NBEAL1Q6ZS30 2694 aa11.85□□□□□ -0.51
SPG7-204ENST00000561911 TRAV25A0A0B4J276 109 aa11.84□□□□□ -0.51
SPG7-204ENST00000561911 CD5P06127 495 aa11.84□□□□□ -0.51
SPG7-204ENST00000561911 EIF5AP63241 154 aaKnown RBP11.84□□□□□ -0.51
SPG7-204ENST00000561911 FAM90A2PQ658T7 463 aa11.84□□□□□ -0.51
SPG7-204ENST00000561911 LEMD1Q68G75 181 aa11.84□□□□□ -0.51
SPG7-204ENST00000561911 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
SPG7-204ENST00000561911 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
SPG7-204ENST00000561911 SLC25A22Q9H936 323 aa11.84□□□□□ -0.51
SPG7-204ENST00000561911 IZUMO1RA6ND01 250 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 HELTA6NFD8 242 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 C4BPBP20851 252 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 SERF2P84101 59 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 ACOT6Q3I5F7 207 aaPredicted RBP11.83□□□□□ -0.52
SPG7-204ENST00000561911 OR8I2Q8N0Y5 310 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 RNF24Q9Y225 148 aa11.83□□□□□ -0.52
SPG7-204ENST00000561911 BOLA2-SMG1P6H3BVE0 249 aa11.82□□□□□ -0.52
SPG7-204ENST00000561911 TSPAN4O14817 238 aa11.82□□□□□ -0.52
SPG7-204ENST00000561911 TPT1P13693 172 aaKnown RBP11.82□□□□□ -0.52
SPG7-204ENST00000561911 M6PRP20645 277 aa11.82□□□□□ -0.52
SPG7-204ENST00000561911 RAB2AP61019 212 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms