RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PFDN2Q9UHV9 154 aa13.77□□□□□ -0.21
HDAC4-217ENST00000553145 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.21
HDAC4-217ENST00000553145 CFDP00746 253 aaPredicted RBP13.76□□□□□ -0.21
HDAC4-217ENST00000553145 EWSR1Q01844 656 aaKnown RBP eCLIP13.76□□□□□ -0.21
HDAC4-217ENST00000553145 IL15RAQ13261 267 aa13.76□□□□□ -0.21
HDAC4-217ENST00000553145 C1orf194Q5T5A4 169 aa13.76□□□□□ -0.21
HDAC4-217ENST00000553145 CYP2G1PQ6ZSU1 146 aa13.76□□□□□ -0.21
HDAC4-217ENST00000553145 STHQ8IWL8 128 aa13.76□□□□□ -0.21
HDAC4-217ENST00000553145 PPP1R14BQ96C90 147 aa13.76□□□□□ -0.21
HDAC4-217ENST00000553145 A0A0J9YWU9 116 aa13.75□□□□□ -0.21
HDAC4-217ENST00000553145 FNDC10F2Z333 226 aa13.75□□□□□ -0.21
HDAC4-217ENST00000553145 L7N2F9 121 aa13.75□□□□□ -0.21
HDAC4-217ENST00000553145 CA1P00915 261 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-217ENST00000553145 ORM2P19652 201 aa13.75□□□□□ -0.21
HDAC4-217ENST00000553145 VAMP2P63027 116 aa13.75□□□□□ -0.21
HDAC4-217ENST00000553145 ACTL10Q5JWF8 245 aa13.75□□□□□ -0.21
HDAC4-217ENST00000553145 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
HDAC4-217ENST00000553145 DYNC2H1Q8NCM8 4307 aaKnown RBP13.75□□□□□ -0.21
HDAC4-217ENST00000553145 RYR3Q15413 4870 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 SOCS3O14543 225 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 GIG44P09565 113 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-217ENST00000553145 RAB32Q13637 225 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 OR1B1Q8NGR6 318 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 SLC25A32Q9H2D1 315 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 NPVFQ9HCQ7 196 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 SEPSECSQ9HD40 501 aaKnown RBP13.74□□□□□ -0.21
HDAC4-217ENST00000553145 DOK5Q9P104 306 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 MGAT4CQ9UBM8 478 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 SLC45A2Q9UMX9 530 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 AGRNO00468 2067 aa13.74□□□□□ -0.21
HDAC4-217ENST00000553145 FAM24AA6NFZ4 105 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 ZNF98A6NK75 572 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 INMT-MINDY4F8WBC2 141 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 C4BPBP20851 252 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 S100A10P60903 97 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 SNRPD3P62318 126 aaKnown RBP13.73□□□□□ -0.21
HDAC4-217ENST00000553145 SLC38A11Q08AI6 406 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 OR8I2Q8N0Y5 310 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 C17orf77Q96MU5 243 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 SLC25A22Q9H936 323 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 GPN1Q9HCN4 374 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-217ENST00000553145 CSMD3Q7Z407 3707 aa13.73□□□□□ -0.21
HDAC4-217ENST00000553145 SIX6O95475 246 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 LINC00869P0C866 280 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 BCAP31P51572 246 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 CAV2P51636 162 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 DEFB1P60022 68 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 GATAD1Q8WUU5 269 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 TMEM147Q9BVK8 224 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 SCRT1Q9BWW7 348 aa13.72□□□□□ -0.21
HDAC4-217ENST00000553145 H3BRN7 92 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 DEDDO75618 318 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 CST7O76096 145 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 PLP1P60201 277 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 TEPPQ6URK8 271 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 IL17DQ8TAD2 202 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 MARVELD1Q9BSK0 173 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 GGACTQ9BVM4 153 aa13.71□□□□□ -0.21
HDAC4-217ENST00000553145 IGSF23A1L1A6 192 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 GOSR2O14653 212 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 PRAF2O60831 178 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 SPP1P10451 314 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 DEFA1P59665 94 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 DEFA3P59666 94 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 SELENOTP62341 195 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 GDF5OSQ5U4N7 250 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 MORN3Q6PF18 240 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-217ENST00000553145 OR11H2Q8NH07 326 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 RARRES2Q99969 163 aa13.7□□□□□ -0.22
HDAC4-217ENST00000553145 SLC25A39Q9BZJ4 359 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-217ENST00000553145 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-217ENST00000553145 H3BMM0 161 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 AGPAT2O15120 278 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 HYPMO75409 117 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 OR5G3P0C626 314 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 PVALBP20472 110 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-217ENST00000553145 GALR1P47211 349 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 PSMB3P49720 205 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 PATE2Q6UY27 113 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 TMEM217Q8N7C4 229 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 LINC00052Q96N35 136 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 UHRF2Q96PU4 802 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 MGST2Q99735 147 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 SHANK2-AS3Q9BTD1 123 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 HIGD1AQ9Y241 93 aa13.69□□□□□ -0.22
HDAC4-217ENST00000553145 HLA-DRB4P13762 266 aa13.68□□□□□ -0.22
HDAC4-217ENST00000553145 RAP2BP61225 183 aa13.68□□□□□ -0.22
HDAC4-217ENST00000553145 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.68□□□□□ -0.22
HDAC4-217ENST00000553145 TMEM252Q8N6L7 170 aa13.68□□□□□ -0.22
HDAC4-217ENST00000553145 RSG1Q9BU20 258 aa13.68□□□□□ -0.22
HDAC4-217ENST00000553145 ARL6Q9H0F7 186 aa13.68□□□□□ -0.22
HDAC4-217ENST00000553145 HLA-DRB4X5D2U9 266 aa13.68□□□□□ -0.22
HDAC4-217ENST00000553145 ISLRO14498 428 aa13.67□□□□□ -0.22
HDAC4-217ENST00000553145 ID1P41134 155 aa13.67□□□□□ -0.22
HDAC4-217ENST00000553145 SULT1A1P50225 295 aa13.67□□□□□ -0.22
HDAC4-217ENST00000553145 ZNF546Q86UE3 836 aa13.67□□□□□ -0.22
HDAC4-217ENST00000553145 C20orf173Q96LM9 149 aa13.67□□□□□ -0.22
HDAC4-217ENST00000553145 GPR82Q96P67 336 aa13.67□□□□□ -0.22
HDAC4-217ENST00000553145 SAV1Q9H4B6 383 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-217ENST00000553145 CLEC5AQ9NY25 188 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 201.7 ms