RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 DEFB130AP0DP74 79 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 IAPPP10997 89 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 HLA-DRB4P13762 266 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 NPY1RP25929 384 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 RORCP51449 518 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 SUB1P53999 127 aaKnown RBP eCLIP4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 TCTAP57738 103 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 SPCS3P61009 180 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 DLK1P80370 383 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 KCTD21Q4G0X4 260 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 TMEM182Q6ZP80 229 aaPredicted RBP4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 LYZL2Q7Z4W2 148 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 RNF182Q8N6D2 247 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 OR1S2Q8NGQ3 325 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 TERB2Q8NHR7 220 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 NARS2Q96I59 477 aaKnown RBP4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 C7orf50Q9BRJ6 194 aaKnown RBP4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 NIPSNAP3BQ9BS92 247 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 TMEM222Q9H0R3 208 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 RBKSQ9H477 322 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 SCPEP1Q9HB40 452 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 MTFP1Q9UDX5 166 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 PAIP2BQ9ULR5 123 aaKnown RBP4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 HLA-DRB4X5D2U9 266 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 IGKV1OR2-108A0A075B7D4 117 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 RPS10-NUDT3A0A1W2PQS6 291 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 C16orf90A8MZG2 172 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 INS-IGF2F8WCM5 200 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 SOCS3O14543 225 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 CDS2O95674 445 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 NUDT3O95989 172 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 TOMM40O96008 361 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 CD74P04233 296 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 CD5P06127 495 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 HTN1P15515 57 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 HTR2BP41595 481 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 NKX2-1P43699 371 aaPredicted RBP4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 RPL5P46777 297 aaKnown RBP4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 YPEL3P61236 119 aaPredicted RBP4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 SNRPD3P62318 126 aaKnown RBP4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 GAMTQ14353 236 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 SPINK13Q1W4C9 94 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 LGALS9BQ3B8N2 356 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 C2orf83Q53S99 150 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 C1orf134Q5TEV5 83 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 GPR107Q5VW38 600 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 STEAP1BQ6NZ63 245 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 CROCCP3Q8IVE0 287 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 BAP18Q8IXM2 172 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 MAPKAPK5-AS1Q8N8E1 139 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 OR4C16Q8NGL9 310 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 RNF125Q96EQ8 232 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 SLC25A39Q9BZJ4 359 aaPredicted RBP4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 MAGT1Q9H0U3 335 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 SAV1Q9H4B6 383 aaPredicted RBP4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 NAA60Q9H7X0 242 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 SLC25A22Q9H936 323 aa4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 FAM212BQ9NTI7 297 aaPredicted RBP4.81□□□□□ -1.64
PRPF40B-214ENST00000551320 SRRM2Q9UQ35 2752 aaKnown RBP4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 TRAV30A0A087WSZ9 112 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 ZFP92A6NM28 416 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 CORTO00230 105 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 AKR1C4P17516 323 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 DAD1P61803 113 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 FGL1Q08830 312 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 SPCS2Q15005 226 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 CTF1Q16619 201 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 CCDC71LQ8N9Z2 235 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 TMEM229BQ8NBD8 167 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 OR51S1Q8NGJ8 323 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 COQ8AQ8NI60 647 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 ZFAND1Q8TCF1 268 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 RBPMSQ93062 196 aaKnown RBP4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 PPP1R14BQ96C90 147 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 RSG1Q9BU20 258 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 PARD6GQ9BYG4 376 aaPredicted RBP4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 KRTAP1-5Q9BYS1 174 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 SLC25A32Q9H2D1 315 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 DOK5Q9P104 306 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 C14orf166Q9Y224 244 aaKnown RBP4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 RFNGQ9Y644 331 aa4.8□□□□□ -1.64
PRPF40B-214ENST00000551320 A0A087WXM4 84 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 TRAV8-2A0A0B4J237 113 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 A0A0J9YX75 114 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 GAGE12BA1L429 117 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 CRYM-AS1A6NIL9 109 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 F5H768 121 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 H3BP45 60 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 H3BTX0 84 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 RGS5O15539 181 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 TNFAIP8O95379 198 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 HBE1P02100 147 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 SMIM18P0DKX4 95 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 EIF2B2P49770 351 aaKnown RBP4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms