RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SPAG8Q99932 426 aaPredicted RBP15.58■□□□□ 0.09
SCARB1-211ENST00000546215 SMIM3Q9BZL3 60 aa15.58■□□□□ 0.09
SCARB1-211ENST00000546215 FXYD6-FXYD2A0A087WZ82 144 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 SMLR1H3BR10 107 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 MPDU1O75352 247 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 PRR20EP86478 221 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 PRR20CP86479 221 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 PRR20DP86480 221 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 PRR20BP86481 221 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 PRR20AP86496 221 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 WDR61Q9GZS3 305 aaKnown RBP15.58■□□□□ 0.08
SCARB1-211ENST00000546215 ARL6Q9H0F7 186 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 WFDC1Q9HC57 220 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 PFDN2Q9UHV9 154 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 TNFSF18Q9UNG2 199 aa15.58■□□□□ 0.08
SCARB1-211ENST00000546215 NUP62P37198 522 aaPredicted RBP15.57■□□□□ 0.08
SCARB1-211ENST00000546215 RPL29P47914 159 aaKnown RBP15.57■□□□□ 0.08
SCARB1-211ENST00000546215 OPCMLQ14982 345 aa15.57■□□□□ 0.08
SCARB1-211ENST00000546215 MIC13Q5XKP0 118 aa15.57■□□□□ 0.08
SCARB1-211ENST00000546215 NPCDR1Q9BY65 106 aa15.57■□□□□ 0.08
SCARB1-211ENST00000546215 DOK5Q9P104 306 aa15.57■□□□□ 0.08
SCARB1-211ENST00000546215 IGKV3-7A0A075B6H7 116 aa15.56■□□□□ 0.08
SCARB1-211ENST00000546215 RNF222A6NCQ9 220 aa15.56■□□□□ 0.08
SCARB1-211ENST00000546215 HYPMO75409 117 aa15.56■□□□□ 0.08
SCARB1-211ENST00000546215 CD7P09564 240 aa15.56■□□□□ 0.08
SCARB1-211ENST00000546215 PATE2Q6UY27 113 aa15.56■□□□□ 0.08
SCARB1-211ENST00000546215 INO80EQ8NBZ0 244 aaPredicted RBP15.56■□□□□ 0.08
SCARB1-211ENST00000546215 MRAPQ8TCY5 172 aa15.56■□□□□ 0.08
SCARB1-211ENST00000546215 NEURL2Q9BR09 285 aa15.56■□□□□ 0.08
SCARB1-211ENST00000546215 RPL11P62913 178 aaKnown RBP15.55■□□□□ 0.08
SCARB1-211ENST00000546215 C1orf194Q5T5A4 169 aa15.55■□□□□ 0.08
SCARB1-211ENST00000546215 PXDC1Q5TGL8 231 aa15.55■□□□□ 0.08
SCARB1-211ENST00000546215 GTSCR1Q86UQ5 136 aa15.55■□□□□ 0.08
SCARB1-211ENST00000546215 PPP1R14BQ96C90 147 aa15.55■□□□□ 0.08
SCARB1-211ENST00000546215 MS4A6AQ9H2W1 248 aa15.55■□□□□ 0.08
SCARB1-211ENST00000546215 FBXL17Q9UF56 701 aa15.55■□□□□ 0.08
SCARB1-211ENST00000546215 HIGD1AQ9Y241 93 aa15.55■□□□□ 0.08
SCARB1-211ENST00000546215 hCG_2014768A0A024R1R8 64 aa15.54■□□□□ 0.08
SCARB1-211ENST00000546215 ZNF98A6NK75 572 aa15.54■□□□□ 0.08
SCARB1-211ENST00000546215 OR5G3P0C626 314 aa15.54■□□□□ 0.08
SCARB1-211ENST00000546215 CD81P60033 236 aa15.54■□□□□ 0.08
SCARB1-211ENST00000546215 GBGT1Q8N5D6 347 aa15.54■□□□□ 0.08
SCARB1-211ENST00000546215 ST6GAL2Q96JF0 529 aa15.54■□□□□ 0.08
SCARB1-211ENST00000546215 SLC25A39Q9BZJ4 359 aaPredicted RBP15.54■□□□□ 0.08
SCARB1-211ENST00000546215 HELTA6NFD8 242 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 B2MP61769 119 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 PAFAH1B2P68402 229 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 TMEM37Q8WXS4 190 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 UHRF2Q96PU4 802 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 ARV1Q9H2C2 271 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 SLC39A9Q9NUM3 307 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 PXMP4Q9Y6I8 212 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 OR4C46A6NHA9 309 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 H3BRN7 92 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 IFNA5P01569 189 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 TFPI2P48307 235 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 AP2S1P53680 142 aaPredicted RBP15.53■□□□□ 0.08
SCARB1-211ENST00000546215 SIGLEC15Q6ZMC9 328 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 Q6ZRG5 221 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 SHANK2-AS3Q9BTD1 123 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 PARD6GQ9BYG4 376 aaPredicted RBP15.53■□□□□ 0.08
SCARB1-211ENST00000546215 C19orf73Q9NVV2 129 aa15.53■□□□□ 0.08
SCARB1-211ENST00000546215 S100A7P31151 101 aa15.52■□□□□ 0.07
SCARB1-211ENST00000546215 DEFB121Q5J5C9 76 aa15.52■□□□□ 0.07
SCARB1-211ENST00000546215 OR11H4Q8NGC9 324 aa15.52■□□□□ 0.07
SCARB1-211ENST00000546215 SCRT1Q9BWW7 348 aa15.52■□□□□ 0.07
SCARB1-211ENST00000546215 SMAD5-AS1Q9Y6J3 95 aa15.52■□□□□ 0.07
SCARB1-211ENST00000546215 ELOA3CA0A087WX78 387 aaPredicted RBP15.51■□□□□ 0.07
SCARB1-211ENST00000546215 TRAV2A0A0B4J234 112 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 A0A1B0GVG6 124 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 ARPC5O15511 151 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 LEMD1Q68G75 181 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 WFDC3Q8IUB2 231 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 OR8I2Q8N0Y5 310 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 STXBP6Q8NFX7 210 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 SCGB1C1Q8TD33 95 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 DCANP1Q8TF63 244 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 SLC25A22Q9H936 323 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 DNAJC4Q9NNZ3 241 aa15.51■□□□□ 0.07
SCARB1-211ENST00000546215 DNASE2O00115 360 aaPredicted RBP15.5■□□□□ 0.07
SCARB1-211ENST00000546215 COX7A2P2O60397 106 aa15.5■□□□□ 0.07
SCARB1-211ENST00000546215 LINC00305Q7Z4B0 112 aa15.5■□□□□ 0.07
SCARB1-211ENST00000546215 S100A7AQ86SG5 101 aa15.5■□□□□ 0.07
SCARB1-211ENST00000546215 ZNF709Q8N972 641 aa15.5■□□□□ 0.07
SCARB1-211ENST00000546215 RSG1Q9BU20 258 aa15.5■□□□□ 0.07
SCARB1-211ENST00000546215 SLC25A32Q9H2D1 315 aa15.5■□□□□ 0.07
SCARB1-211ENST00000546215 ODF3L2Q3SX64 289 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 C10orf113Q5VZT2 155 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 OR1L4Q8NGR5 311 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 WFDC10AQ9H1F0 79 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 HMSDA8MTL9 139 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 OR11H12B2RN74 326 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 C17orf112F2Z3M2 114 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 K7EQG2 157 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 IGHV4-30-4P0DP06 118 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 ZNF266Q14584 549 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 TCTE3Q8IZS6 198 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 PFDN5Q99471 154 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 FAM110AQ9BQ89 295 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 MFFQ9GZY8 342 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms