RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 A6NNC1 897 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 ZNF705GA8MUZ8 300 aaPredicted RBP11.01□□□□□ -0.65
MSH2-206ENST00000543555 ZFP36P26651 326 aaKnown RBP11.01□□□□□ -0.65
MSH2-206ENST00000543555 C5orf64Q2M2E5 130 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 FAM231DQ6ZW35 169 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 CELSR1Q9NYQ6 3014 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 ARHGAP32A7KAX9 2087 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 SPINK4O60575 86 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 UBE2G1P62253 170 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 HIST2H2BCQ6DN03 193 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 DYNAPQ8N1N2 210 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 UBTD1Q9HAC8 227 aa11.01□□□□□ -0.65
MSH2-206ENST00000543555 NUPR1O60356 82 aa11□□□□□ -0.65
MSH2-206ENST00000543555 HOXB4P17483 251 aaPredicted RBP11□□□□□ -0.65
MSH2-206ENST00000543555 SLC35B1P78383 322 aa11□□□□□ -0.65
MSH2-206ENST00000543555 WDR73Q6P4I2 378 aa11□□□□□ -0.65
MSH2-206ENST00000543555 ZNF600Q6ZNG1 722 aa11□□□□□ -0.65
MSH2-206ENST00000543555 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
MSH2-206ENST00000543555 KLF12Q9Y4X4 402 aa11□□□□□ -0.65
MSH2-206ENST00000543555 OOSP1A8MZH6 123 aa11□□□□□ -0.65
MSH2-206ENST00000543555 CA1P00915 261 aaPredicted RBP11□□□□□ -0.65
MSH2-206ENST00000543555 MT-ND6P03923 174 aa11□□□□□ -0.65
MSH2-206ENST00000543555 COX19Q49B96 90 aa11□□□□□ -0.65
MSH2-206ENST00000543555 C5orf17Q8NAS9 161 aa11□□□□□ -0.65
MSH2-206ENST00000543555 FAM168AQ92567 244 aa11□□□□□ -0.65
MSH2-206ENST00000543555 RBM14Q96PK6 669 aaKnown RBP11□□□□□ -0.65
MSH2-206ENST00000543555 TP53TG3Q9ULZ0 132 aa11□□□□□ -0.65
MSH2-206ENST00000543555 TRAV20A0A0B4J274 112 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 H3BTX0 84 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 CRISP2P16562 243 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 MINOS1Q5TGZ0 78 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 MBD6Q96DN6 1003 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 ATG101Q9BSB4 218 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 Q9H3A6 140 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 C7orf69Q9H7B7 122 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 MRPL27Q9P0M9 148 aaKnown RBP10.99□□□□□ -0.65
MSH2-206ENST00000543555 TMEM14CQ9P0S9 112 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 MINOS1-NBL1R4GNA1 71 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 GATCO43716 136 aaKnown RBP10.99□□□□□ -0.65
MSH2-206ENST00000543555 C9orf152Q5JTZ5 239 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 TMEM136Q6ZRR5 245 aa10.99□□□□□ -0.65
MSH2-206ENST00000543555 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 ZNF562Q6V9R5 426 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 Q8N6K4 173 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 NUDT10Q8NFP7 164 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 SMIM12Q96EX1 92 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 NUDT11Q96G61 164 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 SIRPDQ9H106 197 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 NAT8BQ9UHF3 227 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 AMY1AP04745 511 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 EFNA4P52798 201 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
MSH2-206ENST00000543555 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 MRPL54Q6P161 138 aaKnown RBP10.98□□□□□ -0.65
MSH2-206ENST00000543555 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 SGK494Q96LW2 274 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 NPIPB5A8MRT5 1133 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 TCRAP04437 139 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 CMTM2Q8TAZ6 248 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 NRGNQ92686 78 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 GRAMD2BQ96HH9 432 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 GPR82Q96P67 336 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 ZNF586Q9NXT0 402 aa10.98□□□□□ -0.65
MSH2-206ENST00000543555 HIST1H1EP10412 219 aaKnown RBP10.97□□□□□ -0.65
MSH2-206ENST00000543555 LINC00310P59036 64 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 PKIAP61925 76 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 EBI3Q14213 229 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 TMEM68Q96MH6 324 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 CHRDL1Q9BU40 450 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 IGLV11-55A0A075B6I3 123 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 NCBP2LA6PVI3 153 aaKnown RBP10.97□□□□□ -0.65
MSH2-206ENST00000543555 TOMM40O96008 361 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 NDPQ00604 133 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 Q0VG73 95 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 FMC1Q96HJ9 113 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 FANCD2OSQ96PS1 177 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 SHANK2-AS3Q9BTD1 123 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 OTORQ9NRC9 128 aa10.97□□□□□ -0.65
MSH2-206ENST00000543555 ESDP10768 282 aa10.96□□□□□ -0.65
MSH2-206ENST00000543555 IGHV2-70DA0A0C4DH43 119 aa10.96□□□□□ -0.66
MSH2-206ENST00000543555 HLA-DQA1P01909 254 aa10.96□□□□□ -0.66
MSH2-206ENST00000543555 RAB4BP61018 213 aa10.96□□□□□ -0.66
MSH2-206ENST00000543555 ZNF491Q8N8L2 437 aa10.96□□□□□ -0.66
MSH2-206ENST00000543555 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 H3BRN7 92 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 SERF1AO75920 110 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 LTAP01374 205 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 USF2Q15853 346 aaPredicted RBP10.95□□□□□ -0.66
MSH2-206ENST00000543555 RNF125Q96EQ8 232 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 TMEM11P17152 192 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 BAGE3Q86Y29 109 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 TTC9CQ8N5M4 171 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
MSH2-206ENST00000543555 TBL2Q9Y4P3 447 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 343 ms