RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 RITA1Q96K30 269 aa3.48□□□□□ -1.85
SNHG1-219ENST00000542112 CARD19Q96LW7 228 aa3.48□□□□□ -1.85
SNHG1-219ENST00000542112 C1orf147Q96MC9 270 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-219ENST00000542112 NAA38Q9BRA0 125 aaKnown RBP3.48□□□□□ -1.85
SNHG1-219ENST00000542112 MRPL20Q9BYC9 149 aaKnown RBP3.48□□□□□ -1.85
SNHG1-219ENST00000542112 TTTY10Q9BZA0 68 aa3.48□□□□□ -1.85
SNHG1-219ENST00000542112 VSIRQ9H7M9 311 aa3.48□□□□□ -1.85
SNHG1-219ENST00000542112 GOLGA2P5Q9HBQ8 144 aa3.48□□□□□ -1.85
SNHG1-219ENST00000542112 NHP2Q9NX24 153 aaKnown RBP3.48□□□□□ -1.85
SNHG1-219ENST00000542112 NCKAP5O14513 1909 aa3.48□□□□□ -1.85
SNHG1-219ENST00000542112 A0A0A6YYD4 124 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 LOC107984640A0A0U1RRK4 108 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 A0A1B0GWA3 101 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A10PA6NDY2 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A20PA6NIJ5 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A7PA6NKC0 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A22PA8MWA6 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A12PA8MX19 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A23PA8MXZ1 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 ZIC3O60481 467 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 LMX1BO60663 402 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 PLAUP00749 431 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 IGKV1D-33P01593 117 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 IGKV1-33P01594 117 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 BGLAPP02818 100 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A13PP0C7W8 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM90A24PP0C7X0 464 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 PIRTP0C851 137 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 MGST1P10620 155 aaKnown RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 WT1P19544 449 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 CCL1P22362 96 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 HOXD9P28356 352 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 GCHFRP30047 84 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FXYD2P54710 66 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 DSCR4P56555 118 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 CD164Q04900 197 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 CDSNQ15517 529 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 MLF2Q15773 248 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 SP6Q3SY56 376 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 Q5XG85 94 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 CXCL17Q6UXB2 119 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 RPS19BP1Q86WX3 136 aaKnown RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FAM57AQ8TBR7 257 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 KLK6Q92876 244 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 IFI27L1Q96BM0 104 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 BMFQ96LC9 184 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 NPCDR1Q9BY65 106 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 KRTAP3-1Q9BYR8 98 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 SPRY4Q9C004 299 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 SLC25A22Q9H936 323 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 FGF22Q9HCT0 170 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 KLF13Q9Y2Y9 288 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-219ENST00000542112 DOCK8Q8NF50 2099 aa3.47□□□□□ -1.85
SNHG1-219ENST00000542112 DNAH12Q6ZR08 3092 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 CEP290O15078 2479 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 PRRC2BQ5JSZ5 2229 aaKnown RBP3.46□□□□□ -1.86
SNHG1-219ENST00000542112 C2orf16Q68DN1 1984 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 TRAV13-1A0A0B4J241 112 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 EPM2AB3EWF7 344 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 SPRY2O43597 315 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 IGLV3-27P01718 113 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 P04436 131 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 CTLA4P16410 223 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 TNFRSF4P43489 277 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 MFAP2P55001 183 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 LOXL1Q08397 574 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-219ENST00000542112 C4orf26Q17RF5 130 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 DEFB121Q5J5C9 76 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 ASPHD1Q5U4P2 390 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 DGAT2L7PQ6IED9 249 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 AAED1Q7RTV5 226 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 TBC1D26Q86UD7 250 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF503Q96F45 646 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 ZC2HC1AQ96GY0 325 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 URB1-AS1Q96HZ7 61 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 Q96MF0 132 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 HDHD3Q9BSH5 251 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-219ENST00000542112 AGPAT4-IT1Q9H0P7 198 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 C19orf25Q9UFG5 118 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-219ENST00000542112 PILRAQ9UKJ1 303 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 WDR83OSQ9Y284 106 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF256Q9Y2P7 627 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-219ENST00000542112 LHFPL6Q9Y693 200 aa3.46□□□□□ -1.86
SNHG1-219ENST00000542112 PLXNA2O75051 1894 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 TRBV25-1A0A075B6N4 114 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 TRAV12-2A0A075B6T6 113 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 IGHV3OR15-7A0A075B7D8 119 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 UBE2L5PA0A1B0GUS4 154 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 TMEM89A2RUT3 159 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 LY6LH3BQJ8 138 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 J3QQQ9 107 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 LGALS9O00182 355 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 TIMM23O14925 209 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 IGKCP01834 107 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 PYYP10082 97 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF823P16415 610 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 RPL35AP18077 110 aaKnown RBP3.45□□□□□ -1.86
SNHG1-219ENST00000542112 COL8A2P25067 703 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 SSR2P43308 183 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms