RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PPP1R14BQ96C90 147 aa14.11□□□□□ -0.15
VPS33A-205ENST00000541169 MEGF8Q7Z7M0 2845 aa14.11□□□□□ -0.15
VPS33A-205ENST00000541169 IGHV3-49A0A0A0MS15 119 aa14.1□□□□□ -0.15
VPS33A-205ENST00000541169 APOHP02749 345 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-205ENST00000541169 PRB2P02812 416 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-205ENST00000541169 RPL29P47914 159 aaKnown RBP14.1□□□□□ -0.15
VPS33A-205ENST00000541169 RPL11P62913 178 aaKnown RBP14.1□□□□□ -0.15
VPS33A-205ENST00000541169 DEFB121Q5J5C9 76 aa14.1□□□□□ -0.15
VPS33A-205ENST00000541169 SAMD13Q5VXD3 122 aa14.1□□□□□ -0.15
VPS33A-205ENST00000541169 ATP5SQ99766 215 aa14.1□□□□□ -0.15
VPS33A-205ENST00000541169 UBE2L5PA0A1B0GUS4 154 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 DNASE2O00115 360 aaPredicted RBP14.09□□□□□ -0.15
VPS33A-205ENST00000541169 IFNA5P01569 189 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 ORM2P19652 201 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 CD81P60033 236 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 ZNF709Q8N972 641 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 OR1B1Q8NGR6 318 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 GLMPQ8WWB7 406 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 AQP10Q96PS8 301 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 PFDN5Q99471 154 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 MGST2Q99735 147 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 NEURL2Q9BR09 285 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 PARD6GQ9BYG4 376 aaPredicted RBP14.09□□□□□ -0.15
VPS33A-205ENST00000541169 SEPSECSQ9HD40 501 aaKnown RBP14.09□□□□□ -0.15
VPS33A-205ENST00000541169 HIGD1AQ9Y241 93 aa14.09□□□□□ -0.15
VPS33A-205ENST00000541169 IGHV3OR16-13A0A075B7E8 117 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 IGHV3-74A0A0B4J1X5 117 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 C17orf112F2Z3M2 114 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 FGF7P21781 194 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 SIGLEC15Q6ZMC9 328 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 Q6ZNX1 250 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 Q8N1Y9 231 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 STPG3Q8N7X2 389 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 OR1L4Q8NGR5 311 aa14.08□□□□□ -0.16
VPS33A-205ENST00000541169 ZNF266Q14584 549 aa14.07□□□□□ -0.16
VPS33A-205ENST00000541169 CLINT1Q14677 625 aa14.07□□□□□ -0.16
VPS33A-205ENST00000541169 OR8I2Q8N0Y5 310 aa14.07□□□□□ -0.16
VPS33A-205ENST00000541169 SCGB1C1Q8TD33 95 aa14.07□□□□□ -0.16
VPS33A-205ENST00000541169 GGTLC1Q9BX51 225 aa14.07□□□□□ -0.16
VPS33A-205ENST00000541169 NPCDR1Q9BY65 106 aa14.07□□□□□ -0.16
VPS33A-205ENST00000541169 MS4A6AQ9H2W1 248 aa14.07□□□□□ -0.16
VPS33A-205ENST00000541169 IGHV3-66A0A0C4DH42 116 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 OR5G3P0C626 314 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 GATA2P23769 480 aaPredicted RBP14.06□□□□□ -0.16
VPS33A-205ENST00000541169 GALR1P47211 349 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 MEOX2P50222 304 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 PRR20EP86478 221 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 PRR20CP86479 221 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 PRR20DP86480 221 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 PRR20BP86481 221 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 PRR20AP86496 221 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 OPCMLQ14982 345 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 TMEM182Q6ZP80 229 aaPredicted RBP14.06□□□□□ -0.16
VPS33A-205ENST00000541169 WDR61Q9GZS3 305 aaKnown RBP14.06□□□□□ -0.16
VPS33A-205ENST00000541169 ARL6Q9H0F7 186 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 DNAJC4Q9NNZ3 241 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 NRN1Q9NPD7 142 aa14.06□□□□□ -0.16
VPS33A-205ENST00000541169 ZNF98A6NK75 572 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 OR11H12B2RN74 326 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 COX7A2P2O60397 106 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 RPL7P18124 248 aaKnown RBP14.05□□□□□ -0.16
VPS33A-205ENST00000541169 B2MP61769 119 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 GATAD1Q8WUU5 269 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 SHANK2-AS3Q9BTD1 123 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 SLC25A39Q9BZJ4 359 aaPredicted RBP14.05□□□□□ -0.16
VPS33A-205ENST00000541169 ARV1Q9H2C2 271 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 TUBA4BQ9H853 241 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 SLC39A9Q9NUM3 307 aa14.05□□□□□ -0.16
VPS33A-205ENST00000541169 FXYD6-FXYD2A0A087WZ82 144 aa14.04□□□□□ -0.16
VPS33A-205ENST00000541169 C10orf113Q5VZT2 155 aa14.04□□□□□ -0.16
VPS33A-205ENST00000541169 STXBP6Q8NFX7 210 aa14.04□□□□□ -0.16
VPS33A-205ENST00000541169 TNFSF18Q9UNG2 199 aa14.04□□□□□ -0.16
VPS33A-205ENST00000541169 CMYA5Q8N3K9 4069 aa14.04□□□□□ -0.16
VPS33A-205ENST00000541169 H3BRN7 92 aa14.03□□□□□ -0.16
VPS33A-205ENST00000541169 CD7P09564 240 aa14.03□□□□□ -0.16
VPS33A-205ENST00000541169 IGHV4-30-4P0DP06 118 aa14.03□□□□□ -0.16
VPS33A-205ENST00000541169 SNRPD3P62318 126 aaKnown RBP14.03□□□□□ -0.16
VPS33A-205ENST00000541169 B9D2Q9BPU9 175 aa14.03□□□□□ -0.16
VPS33A-205ENST00000541169 PXMP4Q9Y6I8 212 aa14.03□□□□□ -0.16
VPS33A-205ENST00000541169 K7EQG2 157 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 TAAR5O14804 337 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 Q5BKY6 102 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 MIC13Q5XKP0 118 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 LINC00305Q7Z4B0 112 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 GBGT1Q8N5D6 347 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 DCANP1Q8TF63 244 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 C19orf73Q9NVV2 129 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 DOK5Q9P104 306 aa14.02□□□□□ -0.17
VPS33A-205ENST00000541169 IGKV3-7A0A075B6H7 116 aa14.01□□□□□ -0.17
VPS33A-205ENST00000541169 ID1P41134 155 aa14.01□□□□□ -0.17
VPS33A-205ENST00000541169 SLC25A22Q9H936 323 aa14.01□□□□□ -0.17
VPS33A-205ENST00000541169 TIMM9Q9Y5J7 89 aa14.01□□□□□ -0.17
VPS33A-205ENST00000541169 SELENOKQ9Y6D0 94 aa14.01□□□□□ -0.17
VPS33A-205ENST00000541169 BORCS7-ASMTA0A0B4J1R7 106 aa14□□□□□ -0.17
VPS33A-205ENST00000541169 HMSDA8MTL9 139 aa14□□□□□ -0.17
VPS33A-205ENST00000541169 NHLRC4P0CG21 123 aaPredicted RBP14□□□□□ -0.17
VPS33A-205ENST00000541169 TFPI2P48307 235 aa14□□□□□ -0.17
VPS33A-205ENST00000541169 ZNF345Q14585 488 aa14□□□□□ -0.17
VPS33A-205ENST00000541169 PATE2Q6UY27 113 aa14□□□□□ -0.17
VPS33A-205ENST00000541169 BPIFA4PQ86YQ2 179 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms