RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 METTL15P1P0C7V9 234 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 C4BPBP20851 252 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 TAS2R30P59541 319 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 SNRPD3P62318 126 aaKnown RBP10.8□□□□□ -0.68
USP28-204ENST00000537642 ASAH1Q13510 395 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 MZT2BQ6NZ67 158 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 BPIFCQ8NFQ6 507 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 OR11H2Q8NH07 326 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 PPP1R14BQ96C90 147 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 WDR12Q9GZL7 423 aaKnown RBP10.8□□□□□ -0.68
USP28-204ENST00000537642 FBXL17Q9UF56 701 aa10.8□□□□□ -0.68
USP28-204ENST00000537642 C7orf66A4D0T2 115 aa10.79□□□□□ -0.68
USP28-204ENST00000537642 SPP1P10451 314 aa10.79□□□□□ -0.68
USP28-204ENST00000537642 ATF4P18848 351 aaPredicted RBP10.79□□□□□ -0.68
USP28-204ENST00000537642 RRAS2P62070 204 aaPredicted RBP10.79□□□□□ -0.68
USP28-204ENST00000537642 DLK1P80370 383 aa10.79□□□□□ -0.68
USP28-204ENST00000537642 MORN3Q6PF18 240 aaPredicted RBP10.79□□□□□ -0.68
USP28-204ENST00000537642 GSG1LQ6UXU4 331 aa10.79□□□□□ -0.68
USP28-204ENST00000537642 CYP2G1PQ6ZSU1 146 aa10.79□□□□□ -0.68
USP28-204ENST00000537642 C12orf45Q8N5I9 185 aaPredicted RBP10.79□□□□□ -0.68
USP28-204ENST00000537642 PTTG2Q9NZH5 202 aa10.79□□□□□ -0.68
USP28-204ENST00000537642 SLC45A2Q9UMX9 530 aa10.79□□□□□ -0.68
USP28-204ENST00000537642 ZNF98A6NK75 572 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 FAM25EA8MYX2 175 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 SOCS3O14543 225 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 UPK1BO75841 260 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 ORM2P19652 201 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 ARL16Q0P5N6 197 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 PMS2P11Q13670 270 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 ZNF846Q147U1 533 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 OR8I2Q8N0Y5 310 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 OR10P1Q8NGE3 313 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 SLC25A32Q9H2D1 315 aa10.78□□□□□ -0.68
USP28-204ENST00000537642 C5orf51A6NDU8 294 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 CXorf65A6NEN9 183 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 FNDC10F2Z333 226 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 H3BMM0 161 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 K7EPK0 472 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 DEFB1P60022 68 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 IFITM3Q01628 133 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 TMEM41BQ5BJD5 291 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 TMEM217Q8N7C4 229 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 OR1B1Q8NGR6 318 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 C2orf50Q96LR7 162 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 TMEM147Q9BVK8 224 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 C11orf1Q9H5F2 150 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 NPVFQ9HCQ7 196 aa10.77□□□□□ -0.69
USP28-204ENST00000537642 LSM5Q9Y4Y9 91 aaKnown RBP10.77□□□□□ -0.69
USP28-204ENST00000537642 IL5P05113 134 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 PSMB3P49720 205 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 GDF5OSQ5U4N7 250 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 CSNK1G2-AS1Q8NCQ2 148 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 C17orf77Q96MU5 243 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 LINC00052Q96N35 136 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
USP28-204ENST00000537642 CLEC5AQ9NY25 188 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 DOK5Q9P104 306 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 MGAT4CQ9UBM8 478 aa10.76□□□□□ -0.69
USP28-204ENST00000537642 H3BRN7 92 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 L7N2F9 121 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 DEFB4AO15263 64 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 LINC00869P0C866 280 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 HLA-DRB4P13762 266 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 ID1P41134 155 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 GALR1P47211 349 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 PLP1P60201 277 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 SELENOTP62341 195 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 VAMP2P63027 116 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 IL15RAQ13261 267 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 Q8NAQ8 132 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 ENKURQ8TC29 256 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 RSG1Q9BU20 258 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 SCRT1Q9BWW7 348 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 HLA-DRB4X5D2U9 266 aa10.75□□□□□ -0.69
USP28-204ENST00000537642 ZNF705EA8MWA4 302 aaPredicted RBP10.74□□□□□ -0.69
USP28-204ENST00000537642 ISLRO14498 428 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 DEDDO75618 318 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 SLC38A11Q08AI6 406 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 TEPPQ6URK8 271 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 SHANK2-AS3Q9BTD1 123 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 GGACTQ9BVM4 153 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 SLC25A39Q9BZJ4 359 aaPredicted RBP10.74□□□□□ -0.69
USP28-204ENST00000537642 SAV1Q9H4B6 383 aaPredicted RBP10.74□□□□□ -0.69
USP28-204ENST00000537642 HIGD1AQ9Y241 93 aa10.74□□□□□ -0.69
USP28-204ENST00000537642 NUPR2A6NF83 97 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 FAM24AA6NFZ4 105 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 HYPMO75409 117 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 JTBO76095 146 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 S100A7P31151 101 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 MEOX2P50222 304 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 BCAP31P51572 246 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 RAP2BP61225 183 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 SAMD13Q5VXD3 122 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
USP28-204ENST00000537642 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 C16orf92Q96LL3 132 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 C20orf173Q96LM9 149 aa10.73□□□□□ -0.69
USP28-204ENST00000537642 GPR82Q96P67 336 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms