RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 LINC00869P0C866 280 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 IGHV4-30-4P0DP06 118 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 ORM2P19652 201 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 CAMLGP49069 296 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 CD81P60033 236 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 PXDC1Q5TGL8 231 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 ASCL2Q99929 193 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 WDR83OSQ9Y284 106 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 HSPB11Q9Y547 144 aa10.15□□□□□ -0.78
RPAIN-205ENST00000536255 A8MZ25 164 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 DNASE2O00115 360 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-205ENST00000536255 BUB3O43684 328 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 HYPMO75409 117 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 GATA2P23769 480 aaPredicted RBP10.14□□□□□ -0.79
RPAIN-205ENST00000536255 PLP1P60201 277 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 CLINT1Q14677 625 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 C1orf194Q5T5A4 169 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 FAM90A2PQ658T7 463 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 C16orf54Q6UWD8 224 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 OR1B1Q8NGR6 318 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 OR2T35Q8NGX2 323 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 MGST2Q99735 147 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 NEURL2Q9BR09 285 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 FBXL17Q9UF56 701 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 RNF24Q9Y225 148 aa10.14□□□□□ -0.79
RPAIN-205ENST00000536255 TRAV2A0A0B4J234 112 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 FGF7P21781 194 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 CMC4P56277 68 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-205ENST00000536255 TMEM182Q6ZP80 229 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-205ENST00000536255 Q6ZRG5 221 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 SBSPONQ8IVN8 264 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 CHAC2Q8WUX2 184 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 GLMPQ8WWB7 406 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 ATP5SQ99766 215 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 C19orf73Q9NVV2 129 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 HIGD1AQ9Y241 93 aa10.13□□□□□ -0.79
RPAIN-205ENST00000536255 IGKV3-7A0A075B6H7 116 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 IFNA5P01569 189 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 CD7P09564 240 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 OR5G3P0C626 314 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 RPL29P47914 159 aaKnown RBP10.12□□□□□ -0.79
RPAIN-205ENST00000536255 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 OR8I2Q8N0Y5 310 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 ZNF709Q8N972 641 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 INO80EQ8NBZ0 244 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-205ENST00000536255 FAM110AQ9BQ89 295 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 GGTLC1Q9BX51 225 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 ARL6Q9H0F7 186 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 TUBA4BQ9H853 241 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
RPAIN-205ENST00000536255 ELOA3CA0A087WX78 387 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-205ENST00000536255 FXYD6-FXYD2A0A087WZ82 144 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 OR11H12B2RN74 326 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 COX7A2P2O60397 106 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 TFPI2P48307 235 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 B2MP61769 119 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 OPCMLQ14982 345 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 GBGT1Q8N5D6 347 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 STPG3Q8N7X2 389 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 GPR82Q96P67 336 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 AQP10Q96PS8 301 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 NPCDR1Q9BY65 106 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 DOK5Q9P104 306 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 U3KQK5 164 aa10.11□□□□□ -0.79
RPAIN-205ENST00000536255 ZNF98A6NK75 572 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 C17orf112F2Z3M2 114 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 GALR1P47211 349 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 MIC13Q5XKP0 118 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 Q6ZNX1 250 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 WFDC3Q8IUB2 231 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 OR1L4Q8NGR5 311 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 SCGB1C1Q8TD33 95 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 PFDN5Q99471 154 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 SHANK2-AS3Q9BTD1 123 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 SLC25A39Q9BZJ4 359 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-205ENST00000536255 SMIM3Q9BZL3 60 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 WDR61Q9GZS3 305 aaKnown RBP10.1□□□□□ -0.79
RPAIN-205ENST00000536255 ARV1Q9H2C2 271 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 NRN1Q9NPD7 142 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 SLC39A9Q9NUM3 307 aa10.1□□□□□ -0.79
RPAIN-205ENST00000536255 H3BRN7 92 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 PRR20EP86478 221 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 PRR20CP86479 221 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 PRR20DP86480 221 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 PRR20BP86481 221 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 PRR20AP86496 221 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 ZNF266Q14584 549 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 Q5BKY6 102 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 SAMD13Q5VXD3 122 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 C10orf113Q5VZT2 155 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 DEFB125Q8N687 156 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 SLC25A22Q9H936 323 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 DNAJC4Q9NNZ3 241 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 PXMP4Q9Y6I8 212 aa10.09□□□□□ -0.79
RPAIN-205ENST00000536255 HUWE1Q7Z6Z7 4374 aaKnown RBP10.08□□□□□ -0.8
RPAIN-205ENST00000536255 RPL7P18124 248 aaKnown RBP10.08□□□□□ -0.8
RPAIN-205ENST00000536255 LINC00305Q7Z4B0 112 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms