RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 LIM2P55344 173 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 TAS2R45P59539 299 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 TMEM258P61165 79 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ZNF90Q03938 601 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 FAM53BQ14153 422 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CLEC12BQ2HXU8 276 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 RRN3P1Q2M238 152 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CEACAM16Q2WEN9 425 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ETDBQ3ZM63 59 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 Q56UQ5 140 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 NMSQ5H8A3 153 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 KLF17Q5JT82 389 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 NOXRED1Q6NXP6 359 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 MOB3BQ86TA1 216 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 SLC22A18ASQ8N1D0 253 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 C3orf22Q8N5N4 141 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CLDN19Q8N6F1 224 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ZNF645Q8N7E2 425 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 TMEM99Q8N816 258 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 TSKUQ8WUA8 353 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CT55Q8WUE5 264 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 FGF13Q92913 245 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CHCHD1Q96BP2 118 aaKnown RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 FAM3DQ96BQ1 224 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 C20orf78Q9BR46 151 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 DCTN5Q9BTE1 182 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 RPP25Q9BUL9 199 aaKnown RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 SLC25A39Q9BZJ4 359 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ULBP3Q9BZM4 244 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 GNB4Q9HAV0 340 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ANAPC10Q9UM13 185 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 KLF12Q9Y4X4 402 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ARL2-SNX15V9GYD0 113 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 LAMA1P25391 3075 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 LOC400499M0QZD8 3231 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ACACBO00763 2458 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CHD8Q9HCK8 2581 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ZZEF1O43149 2961 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ZNF106Q9H2Y7 1883 aaKnown RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 KMT2BQ9UMN6 2715 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-219ENST00000534049 C3orf85A0A1B0GTC6 90 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 LOC101059948A0A1B0GTJ6 334 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 TEX50A0A1B0GTY4 177 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 GRIFINA4D1Z8 144 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 C2orf70A6NJV1 201 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 ZFP92A6NM28 416 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 PIN1P1O15428 100 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 CCL16O15467 120 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 ENSAO43768 121 aaKnown RBP3.32□□□□□ -1.88
ITGB1-219ENST00000534049 FCGR3BO75015 233 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 APCSP02743 223 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 FGF1P05230 155 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 CPMP14384 443 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 GATA2P23769 480 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-219ENST00000534049 AQP1P29972 269 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 MPV17P39210 176 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 TMEM50BP56557 158 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 RBM11P57052 281 aaKnown RBP3.32□□□□□ -1.88
ITGB1-219ENST00000534049 TAF10Q12962 218 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 DIAPH2-AS1Q14236 149 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 WFDC2Q14508 124 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 PHLDA2Q53GA4 152 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 C9orf153Q5TBE3 101 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 OR4C11Q6IEV9 310 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 FAM166AQ6J272 317 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 Q6ZT83 130 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 TEN1Q86WV5 123 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 GAPTQ8N292 157 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 TMEM86BQ8N661 226 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 OTOSQ8NHW6 89 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 PIFOQ8TCI5 191 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 COPS9Q8WXC6 57 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 ADAT3Q96EY9 351 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-219ENST00000534049 PELI1Q96FA3 418 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 SLC25A44Q96H78 314 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-219ENST00000534049 AMELYQ99218 206 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 PBOV1Q9GZY1 135 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 PELI2Q9HAT8 420 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 PRO0461Q9UI25 63 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 ZNF835Q9Y2P0 537 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 OARD1Q9Y530 152 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 TIMM9Q9Y5J7 89 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 CHCHD2Q9Y6H1 151 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-219ENST00000534049 R4GN57 208 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 F5P12259 2224 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 CELSR3Q9NYQ7 3312 aa3.32□□□□□ -1.88
ITGB1-219ENST00000534049 TPRP12270 2363 aaKnown RBP3.31□□□□□ -1.88
ITGB1-219ENST00000534049 FANCMQ8IYD8 2048 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 TDRD15B5MCY1 1934 aaKnown RBP3.31□□□□□ -1.88
ITGB1-219ENST00000534049 A0A087X0K7 114 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 IGHV1-24A0A0C4DH33 117 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 SMIM28A0A1B0GU29 152 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 SNURFLB1AK76 121 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 SHISA9B4DS77 424 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 NDUFC2-KCTD14E9PQ53 114 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 CECR9P0C854 216 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 CXCL8P10145 99 aa3.31□□□□□ -1.88
ITGB1-219ENST00000534049 CRYGAP11844 174 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms