RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 TMEM213A2RRL7 107 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 C2orf70A6NJV1 201 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 BCL2L11O43521 198 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 CXCL2P19875 107 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 CBLN1P23435 193 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 CRYBB3P26998 211 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 LYZP61626 148 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 B2MP61769 119 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 PRR20EP86478 221 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 PRR20CP86479 221 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 PRR20DP86480 221 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 PRR20BP86481 221 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 PRR20AP86496 221 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 OR1L4Q8NGR5 311 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 GNPNAT1Q96EK6 184 aaPredicted RBP13.05□□□□□ -0.32
CTSB-229ENST00000533572 GRAMD2BQ96HH9 432 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 ZNF414Q96IQ9 312 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 PFDN5Q99471 154 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 PBDC1Q9BVG4 233 aa13.05□□□□□ -0.32
CTSB-229ENST00000533572 TECRQ9NZ01 308 aaKnown RBP13.05□□□□□ -0.32
CTSB-229ENST00000533572 IGHV7-4-1A0A0J9YVY3 117 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 HYPMO75409 117 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 CSN3P07498 182 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 FOLR2P14207 255 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 TM4SF20Q53R12 229 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 TMUB2Q71RG4 321 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 STPG3Q8N7X2 389 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 B9D2Q9BPU9 175 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 PSMG3Q9BT73 122 aaPredicted RBP13.04□□□□□ -0.32
CTSB-229ENST00000533572 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 SMPXQ9UHP9 88 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 PXMP4Q9Y6I8 212 aa13.04□□□□□ -0.32
CTSB-229ENST00000533572 GP9P14770 177 aa13.03□□□□□ -0.32
CTSB-229ENST00000533572 ORM2P19652 201 aa13.03□□□□□ -0.32
CTSB-229ENST00000533572 GATA2P23769 480 aaPredicted RBP13.03□□□□□ -0.32
CTSB-229ENST00000533572 CD300CQ08708 224 aa13.03□□□□□ -0.32
CTSB-229ENST00000533572 USF2Q15853 346 aaPredicted RBP13.03□□□□□ -0.32
CTSB-229ENST00000533572 LGALSLQ3ZCW2 172 aaPredicted RBP13.03□□□□□ -0.32
CTSB-229ENST00000533572 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
CTSB-229ENST00000533572 RPL7L1Q6DKI1 246 aaKnown RBP13.03□□□□□ -0.32
CTSB-229ENST00000533572 OR2K2Q8NGT1 345 aa13.03□□□□□ -0.32
CTSB-229ENST00000533572 DYNLRB2Q8TF09 96 aa13.03□□□□□ -0.32
CTSB-229ENST00000533572 SMAD5-AS1Q9Y6J3 95 aa13.03□□□□□ -0.32
CTSB-229ENST00000533572 COX7A2P2O60397 106 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 IGLV1-51P01701 117 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 SERF2P84101 59 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 LAMTOR1Q6IAA8 161 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 IL34Q6ZMJ4 242 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 TMEM182Q6ZP80 229 aaPredicted RBP13.02□□□□□ -0.33
CTSB-229ENST00000533572 OR1B1Q8NGR6 318 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 GATAD1Q8WUU5 269 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 PPP1R14BQ96C90 147 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 RNF2Q99496 336 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 HIGD1AQ9Y241 93 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 U3KQE9 123 aa13.02□□□□□ -0.33
CTSB-229ENST00000533572 IGHV3OR16-8A0A075B7F1 116 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 MBP02144 154 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 OR5G3P0C626 314 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 HSD17B11Q8NBQ5 300 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 RSG1Q9BU20 258 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 ZNF471Q9BX82 626 aaPredicted RBP13.01□□□□□ -0.33
CTSB-229ENST00000533572 VSIRQ9H7M9 311 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 DNAJC4Q9NNZ3 241 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 CYTL1Q9NRR1 136 aa13.01□□□□□ -0.33
CTSB-229ENST00000533572 CHEK1O14757 476 aa13□□□□□ -0.33
CTSB-229ENST00000533572 ZNF207O43670 478 aaKnown RBP13□□□□□ -0.33
CTSB-229ENST00000533572 TPT1P13693 172 aaKnown RBP13□□□□□ -0.33
CTSB-229ENST00000533572 ATP6V0CP27449 155 aa13□□□□□ -0.33
CTSB-229ENST00000533572 ACOT6Q3I5F7 207 aaPredicted RBP13□□□□□ -0.33
CTSB-229ENST00000533572 C10orf113Q5VZT2 155 aa13□□□□□ -0.33
CTSB-229ENST00000533572 LCN12Q6JVE5 192 aa13□□□□□ -0.33
CTSB-229ENST00000533572 C9orf62Q8N4C0 152 aa13□□□□□ -0.33
CTSB-229ENST00000533572 OR2G3Q8NGZ4 309 aa13□□□□□ -0.33
CTSB-229ENST00000533572 ARV1Q9H2C2 271 aa13□□□□□ -0.33
CTSB-229ENST00000533572 TRAV25A0A0B4J276 109 aa12.99□□□□□ -0.33
CTSB-229ENST00000533572 HELTA6NFD8 242 aa12.99□□□□□ -0.33
CTSB-229ENST00000533572 BUB3O43684 328 aa12.99□□□□□ -0.33
CTSB-229ENST00000533572 EIF5AL1Q6IS14 154 aaKnown RBP12.99□□□□□ -0.33
CTSB-229ENST00000533572 SLC51BQ86UW2 128 aa12.99□□□□□ -0.33
CTSB-229ENST00000533572 STOML3Q8TAV4 291 aa12.99□□□□□ -0.33
CTSB-229ENST00000533572 GPR82Q96P67 336 aa12.99□□□□□ -0.33
CTSB-229ENST00000533572 DOK5Q9P104 306 aa12.99□□□□□ -0.33
CTSB-229ENST00000533572 DEFB114Q30KQ6 69 aa12.98□□□□□ -0.33
CTSB-229ENST00000533572 FFAR4Q5NUL3 377 aa12.98□□□□□ -0.33
CTSB-229ENST00000533572 C16orf54Q6UWD8 224 aa12.98□□□□□ -0.33
CTSB-229ENST00000533572 BAP18Q8IXM2 172 aa12.98□□□□□ -0.33
CTSB-229ENST00000533572 SHANK2-AS3Q9BTD1 123 aa12.98□□□□□ -0.33
CTSB-229ENST00000533572 MRPL32Q9BYC8 188 aaKnown RBP12.98□□□□□ -0.33
CTSB-229ENST00000533572 SLC25A39Q9BZJ4 359 aaPredicted RBP12.98□□□□□ -0.33
CTSB-229ENST00000533572 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 H3BRN7 92 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 SEC11BP0C7V7 166 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 M6PRP20645 277 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 RBPMS2Q6ZRY4 209 aaKnown RBP12.97□□□□□ -0.33
CTSB-229ENST00000533572 LINC00305Q7Z4B0 112 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms