RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 Q6ZS92 163 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 SMIM5Q71RC9 77 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 ZNF567Q8N184 647 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 TOMM5Q8N4H5 51 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 OR8G5Q8NG78 346 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 OR52R1Q8NGF1 315 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 OR2K2Q8NGT1 345 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 OR8S1Q8NH09 359 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 MFSD8Q8NHS3 518 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 PPTC7Q8NI37 304 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 THEM6Q8WUY1 208 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 OR5P3Q8WZ94 311 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 SLC25A21Q9BQT8 299 aaPredicted RBP2.49□□□□□ -2.01
SKP1-208ENST00000521216 AGMATQ9BSE5 352 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 TMEM70Q9BUB7 260 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 MRPL32Q9BYC8 188 aaKnown RBP2.49□□□□□ -2.01
SKP1-208ENST00000521216 SLC35B3Q9H1N7 401 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 HES4Q9HCC6 221 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 PRTFDC1Q9NRG1 225 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 NDUFB11Q9NX14 153 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 TP53TG1Q9Y2A0 90 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 ZNF257Q9Y2Q1 563 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 SOX21Q9Y651 276 aaPredicted RBP2.49□□□□□ -2.01
SKP1-208ENST00000521216 C3P01024 1663 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 SBF1O95248 1867 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 DOCK5Q9H7D0 1870 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 DOCK2Q92608 1830 aa2.49□□□□□ -2.01
SKP1-208ENST00000521216 C5P01031 1676 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 AFDNP55196 1824 aaKnown RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 PARP14Q460N5 1801 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 FXYD6-FXYD2A0A087WZ82 144 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 LOC102724200A0A096LPH7 203 aaPredicted RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 CCL15-CCL14A0A0B4J2E2 113 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 A0A1B0GV50 99 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 F8W1H4 67 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 K7EN84 100 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 K7EP34 96 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 APOC4-APOC2K7ER74 178 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 PSPHP1O15172 72 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 RER1O15258 196 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 HYPMO75409 117 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 OR2H2O95918 312 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TNFP01375 233 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 HLA-DRB1P01911 266 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 BLVRBP30043 206 aaPredicted RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 TSPOP30536 169 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 GLRXP35754 106 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 EMP1P54849 157 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 YPEL3P61236 119 aaPredicted RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 C1DQ13901 141 aaKnown RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 ADIRFQ15847 76 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TAL2Q16559 108 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 CCL15Q16663 113 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TDRG1Q3Y452 100 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 OR10J3Q5JRS4 329 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 SPATA31B1PQ5VZV4 182 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 AMMECR1LQ6DCA0 310 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TNFAIP8L2Q6P589 184 aaPredicted RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 Q6ZT83 130 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 DAZ4Q86SG3 579 aaKnown RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 C1orf174Q8IYL3 243 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 BLIDQ8IZY5 108 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 SLC25A29Q8N8R3 303 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 ZDHHC22Q8N966 263 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 GATD1Q8NB37 220 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 OR2M3Q8NG83 312 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 OR51A4Q8NGJ6 313 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 OR1L8Q8NGR8 309 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 ATP6V0E2Q8NHE4 81 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TWIST2Q8WVJ9 160 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 BORCS7Q96B45 105 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 DDIT4LQ96D03 193 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TVP23CQ96ET8 276 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 AP1S3Q96PC3 154 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 SNRNP25Q9BV90 132 aaKnown RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 FXYD6Q9H0Q3 95 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 OR2D2Q9H210 308 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TCEAL2Q9H3H9 227 aaPredicted RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 DAZ1Q9NQZ3 744 aaKnown RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 ACER3Q9NUN7 267 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 IDI2-AS1Q9NZ38 188 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 COMMD9Q9P000 198 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 OR5V1Q9UGF6 321 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 RABAC1Q9UI14 185 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 COQ4Q9Y3A0 265 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 NOP16Q9Y3C1 178 aaKnown RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 ZNF780BQ9Y6R6 833 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 CICQ96RK0 1608 aaPredicted RBP2.48□□□□□ -2.01
SKP1-208ENST00000521216 NUP188Q5SRE5 1749 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 PKD1L3Q7Z443 1732 aa2.48□□□□□ -2.01
SKP1-208ENST00000521216 TRIP11Q15643 1979 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 SPAARA0A1B0GVQ0 90 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 IRGMA1A4Y4 181 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 C5orf49A4QMS7 147 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 TLCD2A6NGC4 264 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 TMEM212A6NML5 194 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 UMAD1C9J7I0 102 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 C9JAW5 83 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 TMEM262E9PQX1 116 aa2.47□□□□□ -2.01
SKP1-208ENST00000521216 TMEM250H0YL14 139 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms