RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 ZNF581Q9P0T4 197 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 MARCOQ9UEW3 520 aaPredicted RBP2.38□□□□□ -2.03
PVT1-202ENST00000512617 TP73-AS1Q9UF72 201 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 C5orf42Q9H799 3197 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 TECTAO75443 2155 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 KMT2EQ8IZD2 1858 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 MYO7AQ13402 2215 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF318Q5VUA4 2279 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGHV3-49A0A0A0MS15 119 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGHV5-51A0A0C4DH38 117 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGHV1-58A0A0C4DH39 117 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGKV1-12A0A0C4DH73 117 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 TRBV7-6A0A0J9YX20 115 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGHV5-10-1A0A0J9YXX1 117 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 A0A1B0GUV1 79 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ODAMA1E959 279 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF860A6NHJ4 632 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IFITM10A6NMD0 228 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 EPM2AB3EWF7 344 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 H3BMG7 143 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 LY6LH3BQJ8 138 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 M0R378 163 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 SOCS1O15524 211 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 FSHBP01225 129 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGKV1-5P01602 117 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGKV1D-12P01611 117 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 PRM2P04554 102 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF728P0DKX0 622 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 HIST1H1BP16401 226 aaKnown RBP2.37□□□□□ -2.03
PVT1-202ENST00000512617 CSN1S1P47710 185 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF136P52737 540 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 EIF5AP63241 154 aaKnown RBP2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF141Q15928 474 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 COL5A1-AS1Q5SY13 56 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 AADACL3Q5VUY0 350 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 MORN3Q6PF18 240 aaPredicted RBP2.37□□□□□ -2.03
PVT1-202ENST00000512617 AMTNQ6UX39 209 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 LCNL1Q6ZST4 164 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 SSX8Q7RTT4 187 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF329Q86UD4 541 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF440Q8IYI8 595 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 C4orf33Q8N1A6 199 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 TEX29Q8N6K0 151 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ZNF525Q8N782 197 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 DAND5Q8N907 189 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 OR5H6Q8NGV6 325 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 STAG3L4Q8TBR4 150 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 DCANP1Q8TF63 244 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 OR4C12Q96R67 309 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 TBL1YQ9BQ87 522 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 MRPL57Q9BQC6 102 aaKnown RBP2.37□□□□□ -2.03
PVT1-202ENST00000512617 NAA38Q9BRA0 125 aaKnown RBP2.37□□□□□ -2.03
PVT1-202ENST00000512617 C1QTNF6Q9BXI9 259 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 Q9H521 79 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 SCRT2Q9NQ03 307 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 IL36BQ9NZH7 164 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 CELA1Q9UNI1 258 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 FUT9Q9Y231 359 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 RNF11Q9Y3C5 154 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 PLXNA3P51805 1871 aa2.37□□□□□ -2.03
PVT1-202ENST00000512617 ARHGEF17Q96PE2 2063 aaPredicted RBP2.37□□□□□ -2.03
PVT1-202ENST00000512617 IGLV11-55A0A075B6I3 123 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 TRAV13-1A0A0B4J241 112 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 SPAARA0A1B0GVQ0 90 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 SRRM5B3KS81 715 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 H0YJW9 148 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 K7ERS5 55 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 ZNF324O75467 553 aaPredicted RBP2.36□□□□□ -2.03
PVT1-202ENST00000512617 INSP01308 110 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 T-ENOLP0DO92 83 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 IGHV1-8P0DP01 117 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 RPL22P35268 128 aaKnown RBP2.36□□□□□ -2.03
PVT1-202ENST00000512617 AKR1C2P52895 323 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 CMC4P56277 68 aaPredicted RBP2.36□□□□□ -2.03
PVT1-202ENST00000512617 YPEL3P61236 119 aaPredicted RBP2.36□□□□□ -2.03
PVT1-202ENST00000512617 SP6Q3SY56 376 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 HSD17B12Q53GQ0 312 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 RNASE13Q5GAN3 156 aaKnown RBP2.36□□□□□ -2.03
PVT1-202ENST00000512617 MEIG1Q5JSS6 88 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 C11orf87Q6NUJ2 197 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 Q8N377 158 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 C10orf126Q8N4M7 172 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 C3orf22Q8N5N4 141 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 C14orf178Q8N769 122 aaPredicted RBP2.36□□□□□ -2.03
PVT1-202ENST00000512617 OR5D14Q8NGL3 314 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 OR8D4Q8NGM9 314 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 SHANK2-AS3Q9BTD1 123 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 ADAT1Q9BUB4 502 aaKnown RBP2.36□□□□□ -2.03
PVT1-202ENST00000512617 CHCHD7Q9BUK0 85 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 DERL1Q9BUN8 251 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 BANF2Q9H503 90 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 LHX9Q9NQ69 397 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 SLC39A9Q9NUM3 307 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 CCDC167Q9P0B6 97 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 COL4A2P08572 1712 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 C2orf16Q68DN1 1984 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 CHD5Q8TDI0 1954 aa2.36□□□□□ -2.03
PVT1-202ENST00000512617 MYH15Q9Y2K3 1946 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms