RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 RAB31Q13636 194 aa12.81□□□□□ -0.36
CLDND1-221ENST00000510541 GGTLC1Q9BX51 225 aa12.81□□□□□ -0.36
CLDND1-221ENST00000510541 WDR83OSQ9Y284 106 aa12.81□□□□□ -0.36
CLDND1-221ENST00000510541 TP53TG1Q9Y2A0 90 aa12.81□□□□□ -0.36
CLDND1-221ENST00000510541 DNAH9Q9NYC9 4486 aa12.81□□□□□ -0.36
CLDND1-221ENST00000510541 IGHV3OR16-13A0A075B7E8 117 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 IGHV3-74A0A0B4J1X5 117 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 LYL1P12980 280 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 MEOX2P50222 304 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 S100A10P60903 97 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 OXA1LQ15070 435 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 RGS21Q2M5E4 152 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 Q6ZWC4 215 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 STPG3Q8N7X2 389 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 PPP1R1CQ8WVI7 109 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 TMEM147Q9BVK8 224 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 MAP6D1Q9H9H5 199 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 UQCC1Q9NVA1 299 aa12.8□□□□□ -0.36
CLDND1-221ENST00000510541 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
CLDND1-221ENST00000510541 FAM24AA6NFZ4 105 aa12.79□□□□□ -0.36
CLDND1-221ENST00000510541 MPC2O95563 127 aa12.79□□□□□ -0.36
CLDND1-221ENST00000510541 BCAP31P51572 246 aa12.79□□□□□ -0.36
CLDND1-221ENST00000510541 APOC4P55056 127 aa12.79□□□□□ -0.36
CLDND1-221ENST00000510541 LYZP61626 148 aa12.79□□□□□ -0.36
CLDND1-221ENST00000510541 WFDC3Q8IUB2 231 aa12.79□□□□□ -0.36
CLDND1-221ENST00000510541 ALG5Q9Y673 324 aa12.79□□□□□ -0.36
CLDND1-221ENST00000510541 IGSF23A1L1A6 192 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 ZNF98A6NK75 572 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 H0YIZ8 118 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 AGPAT2O15120 278 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 HYPMO75409 117 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 SIX6O95475 246 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 RPL29P47914 159 aaKnown RBP12.78□□□□□ -0.36
CLDND1-221ENST00000510541 WWC2-AS2Q96NR7 200 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 CLUHP3Q96NS8 147 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 SHANK2-AS3Q9BTD1 123 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 RNF126Q9BV68 326 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 PBDC1Q9BVG4 233 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 NBEAL2Q6ZNJ1 2754 aa12.78□□□□□ -0.36
CLDND1-221ENST00000510541 TENM3Q9P273 2699 aa12.77□□□□□ -0.36
CLDND1-221ENST00000510541 SMCO3A2RU48 225 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 H3BRN7 92 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 CST7O76096 145 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 LINC00869P0C866 280 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 RRAS2P62070 204 aaPredicted RBP12.77□□□□□ -0.37
CLDND1-221ENST00000510541 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.37
CLDND1-221ENST00000510541 RPL11P62913 178 aaKnown RBP12.77□□□□□ -0.37
CLDND1-221ENST00000510541 PRR20EP86478 221 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 PRR20CP86479 221 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 PRR20DP86480 221 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 PRR20BP86481 221 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 PRR20AP86496 221 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 OR2F1Q13607 317 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 TMEM41BQ5BJD5 291 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 TMEM182Q6ZP80 229 aaPredicted RBP12.77□□□□□ -0.37
CLDND1-221ENST00000510541 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 RCHY1Q96PM5 261 aa12.77□□□□□ -0.37
CLDND1-221ENST00000510541 IGHV3-66A0A0C4DH42 116 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 GALR1P47211 349 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 RAP2BP61225 183 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 OR8I2Q8N0Y5 310 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 STXBP6Q8NFX7 210 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 MGST2Q99735 147 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 ASCL2Q99929 193 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 SLC25A39Q9BZJ4 359 aaPredicted RBP12.76□□□□□ -0.37
CLDND1-221ENST00000510541 HIGD1AQ9Y241 93 aa12.76□□□□□ -0.37
CLDND1-221ENST00000510541 ISLRO14498 428 aa12.75□□□□□ -0.37
CLDND1-221ENST00000510541 SOCS3O14543 225 aa12.75□□□□□ -0.37
CLDND1-221ENST00000510541 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
CLDND1-221ENST00000510541 CAMLGP49069 296 aa12.75□□□□□ -0.37
CLDND1-221ENST00000510541 PSMB3P49720 205 aa12.75□□□□□ -0.37
CLDND1-221ENST00000510541 EWSR1Q01844 656 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLDND1-221ENST00000510541 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
CLDND1-221ENST00000510541 PARD6GQ9BYG4 376 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-221ENST00000510541 OR5AC2Q9NZP5 309 aa12.75□□□□□ -0.37
CLDND1-221ENST00000510541 SELENOKQ9Y6D0 94 aa12.75□□□□□ -0.37
CLDND1-221ENST00000510541 A0A087X0K7 114 aa12.74□□□□□ -0.37
CLDND1-221ENST00000510541 ORM2P19652 201 aa12.74□□□□□ -0.37
CLDND1-221ENST00000510541 GATA2P23769 480 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-221ENST00000510541 FGL1Q08830 312 aa12.74□□□□□ -0.37
CLDND1-221ENST00000510541 OPCMLQ14982 345 aa12.74□□□□□ -0.37
CLDND1-221ENST00000510541 TMEM217Q8N7C4 229 aa12.74□□□□□ -0.37
CLDND1-221ENST00000510541 MED28Q9H204 178 aa12.74□□□□□ -0.37
CLDND1-221ENST00000510541 GIPP09681 153 aaPredicted RBP12.73□□□□□ -0.37
CLDND1-221ENST00000510541 SPP1P10451 314 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 ATF4P18848 351 aaPredicted RBP12.73□□□□□ -0.37
CLDND1-221ENST00000510541 CXCL2P19875 107 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 CXCL3P19876 107 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 ID1P41134 155 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 DEFB131AP59861 70 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 MORN3Q6PF18 240 aaPredicted RBP12.73□□□□□ -0.37
CLDND1-221ENST00000510541 PATE2Q6UY27 113 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 Q6ZRG5 221 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 PPP1R14BQ96C90 147 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 PFDN5Q99471 154 aa12.73□□□□□ -0.37
CLDND1-221ENST00000510541 CSTL1Q9H114 145 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms