RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	LYL1	P12980	280 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	PAX9	P55771	341 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	DEFB131A	P59861	70 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	SELENOT	P62341	195 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	DLK1	P80370	383 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	DCANP1	Q8TF63	244 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	PPP1R14B	Q96C90	147 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	GGACT	Q9BVM4	153 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	CSTL1	Q9H114	145 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	NPVF	Q9HCQ7	196 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	NRN1	Q9NPD7	142 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	MGAT4C	Q9UBM8	478 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	RNF24	Q9Y225	148 aa		7.78	□□□□□ -1.16
FXR1-222	ENST00000498658	DNAH7	Q8WXX0	4024 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	IGKV1OR2-108	A0A075B7D4	117 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	C7orf66	A4D0T2	115 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	PMS2P5	A8MQ11	134 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	SPRY2	O43597	315 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	METTL15P1	P0C7V9	234 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	RPL35A	P18077	110 aa	Known RBP	7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	OR2F1	Q13607	317 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	TMEM41B	Q5BJD5	291 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	STH	Q8IWL8	128 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	GPR82	Q96P67	336 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	OVOL2	Q9BRP0	275 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	RETN	Q9HD89	108 aa		7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	RCL1	Q9Y2P8	373 aa	Known RBP	7.77	□□□□□ -1.17
FXR1-222	ENST00000498658	CCS	O14618	274 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	DEDD	O75618	318 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	ZNF688	P0C7X2	276 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	LOR	P23490	312 aa	Predicted RBP	7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	ID1	P41134	155 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	BCAP31	P51572	246 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	LEMD1	Q68G75	181 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	MORN3	Q6PF18	240 aa	Predicted RBP	7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	TEPP	Q6URK8	271 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	NRARP	Q7Z6K4	114 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	OR8I2	Q8N0Y5	310 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	GATAD1	Q8WUU5	269 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	RNF183	Q96D59	192 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	TMEM147	Q9BVK8	224 aa		7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	LSM5	Q9Y4Y9	91 aa	Known RBP	7.76	□□□□□ -1.17
FXR1-222	ENST00000498658	ELOA3C	A0A087WX78	387 aa	Predicted RBP	7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	INMT-MINDY4	F8WBC2	141 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658		K7EPK0	472 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	SPP1	P10451	314 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	ORM2	P19652	201 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	GALR1	P47211	349 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	MEOX2	P50222	304 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	CAV2	P51636	162 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	RAP2B	P61225	183 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	NUTF2	P61970	127 aa	Known RBP	7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	CYCS	P99999	105 aa	Known RBP	7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	IFITM3	Q01628	133 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	RAB31	Q13636	194 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	DEFB135	Q30KP9	77 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	CASC10	Q5T4H9	136 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	PXDC1	Q5TGL8	231 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	CYP2G1P	Q6ZSU1	146 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	FAM24B	Q8N5W8	94 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	TMEM217	Q8N7C4	229 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	OR1B1	Q8NGR6	318 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	MARVELD1	Q9BSK0	173 aa		7.75	□□□□□ -1.17
FXR1-222	ENST00000498658	HYPM	O75409	117 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	RLN2	P04090	185 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	PSMB3	P49720	205 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	PLP1	P60201	277 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	S100A10	P60903	97 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	RRAS2	P62070	204 aa	Predicted RBP	7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	HBG1	P69891	147 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	HBG2	P69892	147 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	ZNF124	Q15973	351 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	PSMG4	Q5JS54	123 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	ZNF546	Q86UE3	836 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	STX12	Q86Y82	276 aa		7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	LYRM2	Q9NU23	88 aa	Predicted RBP	7.74	□□□□□ -1.17
FXR1-222	ENST00000498658	ZNF98	A6NK75	572 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	ISLR	O14498	428 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	GOSR2	O14653	212 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	CA1	P00915	261 aa	Predicted RBP	7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	LINC00869	P0C866	280 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	RPL7	P18124	248 aa	Known RBP	7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	ATF4	P18848	351 aa	Predicted RBP	7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	S100A11	P31949	105 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	SULT1A1	P50225	295 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	SLC38A11	Q08AI6	406 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	IL15RA	Q13261	267 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	ACTL10	Q5JWF8	245 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	SPATA31B1P	Q5VZV4	182 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	TRPT1	Q86TN4	253 aa	Known RBP	7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	NMES1	Q9C002	83 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	SLC25A22	Q9H936	323 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	HIGD1A	Q9Y241	93 aa		7.73	□□□□□ -1.17
FXR1-222	ENST00000498658	CCNK	O75909	580 aa		7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	OR5G3	P0C626	314 aa		7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	GATA2	P23769	480 aa	Predicted RBP	7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	RAB32	Q13637	225 aa		7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	ATP6V1F	Q16864	119 aa		7.72	□□□□□ -1.17
FXR1-222	ENST00000498658	TMEM182	Q6ZP80	229 aa	Predicted RBP	7.72	□□□□□ -1.17
FXR1-222	ENST00000498658		Q6ZRG5	221 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms