RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 Q6ZRG5 221 aa13.91□□□□□ -0.18
TSSC4-210ENST00000496468 HSD17B11Q8NBQ5 300 aa13.91□□□□□ -0.18
TSSC4-210ENST00000496468 SLC39A9Q9NUM3 307 aa13.91□□□□□ -0.18
TSSC4-210ENST00000496468 SMPXQ9UHP9 88 aa13.91□□□□□ -0.18
TSSC4-210ENST00000496468 PFDN2Q9UHV9 154 aa13.91□□□□□ -0.18
TSSC4-210ENST00000496468 HIGD1AQ9Y241 93 aa13.91□□□□□ -0.18
TSSC4-210ENST00000496468 IGHV3OR16-13A0A075B7E8 117 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 IGHV3-74A0A0B4J1X5 117 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 IGHV3-66A0A0C4DH42 116 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 A0A1W2PS18 150 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 HYPMO75409 117 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 OR5G3P0C626 314 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 S100A7P31151 101 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 TMUB2Q71RG4 321 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 ST8SIA2Q92186 375 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 GRAMD2BQ96HH9 432 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 RHPN1-AS1Q9BWJ2 59 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 TECRQ9NZ01 308 aaKnown RBP13.9□□□□□ -0.18
TSSC4-210ENST00000496468 MLXQ9UH92 298 aa13.9□□□□□ -0.18
TSSC4-210ENST00000496468 CHEK1O14757 476 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 JTBO76095 146 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 APOHP02749 345 aaPredicted RBP13.89□□□□□ -0.19
TSSC4-210ENST00000496468 OXLD1Q5BKU9 147 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 S100A7AQ86SG5 101 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 OR1L4Q8NGR5 311 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 PFDN5Q99471 154 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 VSIRQ9H7M9 311 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 TIMM9Q9Y5J7 89 aa13.89□□□□□ -0.19
TSSC4-210ENST00000496468 WIPF1O43516 503 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 IGLV1-51P01701 117 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 ATP6V0CP27449 155 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 FFAR4Q5NUL3 377 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 C9orf62Q8N4C0 152 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 ZNF471Q9BX82 626 aaPredicted RBP13.88□□□□□ -0.19
TSSC4-210ENST00000496468 ARV1Q9H2C2 271 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 CYTL1Q9NRR1 136 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 SELENOKQ9Y6D0 94 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 U3KQE9 123 aa13.88□□□□□ -0.19
TSSC4-210ENST00000496468 ELOA3CA0A087WX78 387 aaPredicted RBP13.87□□□□□ -0.19
TSSC4-210ENST00000496468 G3V4G9 280 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 H3BRN7 92 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 DEFB114Q30KQ6 69 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 LGALSLQ3ZCW2 172 aaPredicted RBP13.87□□□□□ -0.19
TSSC4-210ENST00000496468 CD300EQ496F6 205 aaPredicted RBP13.87□□□□□ -0.19
TSSC4-210ENST00000496468 SAMD5Q5TGI4 173 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 C10orf113Q5VZT2 155 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 LCN12Q6JVE5 192 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 OR2K2Q8NGT1 345 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 GNPNAT1Q96EK6 184 aaPredicted RBP13.87□□□□□ -0.19
TSSC4-210ENST00000496468 UHRF2Q96PU4 802 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 RNF2Q99496 336 aa13.87□□□□□ -0.19
TSSC4-210ENST00000496468 PSMG3Q9BT73 122 aaPredicted RBP13.87□□□□□ -0.19
TSSC4-210ENST00000496468 NKX2-5P52952 324 aaPredicted RBP13.86□□□□□ -0.19
TSSC4-210ENST00000496468 SHANK2-AS3Q9BTD1 123 aa13.86□□□□□ -0.19
TSSC4-210ENST00000496468 SCRT1Q9BWW7 348 aa13.86□□□□□ -0.19
TSSC4-210ENST00000496468 SLC25A39Q9BZJ4 359 aaPredicted RBP13.86□□□□□ -0.19
TSSC4-210ENST00000496468 SH3BGRL3Q9H299 93 aa13.86□□□□□ -0.19
TSSC4-210ENST00000496468 PKD1L1Q8TDX9 2849 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 BUB3O43684 328 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 C4BPBP20851 252 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 GCSAMLQ5JQS6 135 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 LAMTOR1Q6IAA8 161 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 C16orf54Q6UWD8 224 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 PATE2Q6UY27 113 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 RBPMS2Q6ZRY4 209 aaKnown RBP13.85□□□□□ -0.19
TSSC4-210ENST00000496468 TCF24Q7RTU0 167 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 LINC00305Q7Z4B0 112 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 TMEM61Q8N0U2 210 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 OR2G3Q8NGZ4 309 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 GATAD1Q8WUU5 269 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 GLMPQ8WWB7 406 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 TMEM37Q8WXS4 190 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 SLC25A22Q9H936 323 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 DNAJC4Q9NNZ3 241 aa13.85□□□□□ -0.19
TSSC4-210ENST00000496468 ZNF98A6NK75 572 aa13.84□□□□□ -0.19
TSSC4-210ENST00000496468 CD5P06127 495 aa13.84□□□□□ -0.19
TSSC4-210ENST00000496468 EIF5AP63241 154 aaKnown RBP13.84□□□□□ -0.19
TSSC4-210ENST00000496468 C1orf194Q5T5A4 169 aa13.84□□□□□ -0.19
TSSC4-210ENST00000496468 SLC25A32Q9H2D1 315 aa13.84□□□□□ -0.19
TSSC4-210ENST00000496468 RNF24Q9Y225 148 aa13.84□□□□□ -0.19
TSSC4-210ENST00000496468 RFNGQ9Y644 331 aa13.84□□□□□ -0.19
TSSC4-210ENST00000496468 TRAV25A0A0B4J276 109 aa13.83□□□□□ -0.2
TSSC4-210ENST00000496468 HELTA6NFD8 242 aa13.83□□□□□ -0.2
TSSC4-210ENST00000496468 TPT1P13693 172 aaKnown RBP13.83□□□□□ -0.2
TSSC4-210ENST00000496468 ACOT6Q3I5F7 207 aaPredicted RBP13.83□□□□□ -0.2
TSSC4-210ENST00000496468 LEMD1Q68G75 181 aa13.83□□□□□ -0.2
TSSC4-210ENST00000496468 SIGLEC15Q6ZMC9 328 aa13.83□□□□□ -0.2
TSSC4-210ENST00000496468 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.2
TSSC4-210ENST00000496468 STOML3Q8TAV4 291 aa13.83□□□□□ -0.2
TSSC4-210ENST00000496468 IZUMO1RA6ND01 250 aa13.82□□□□□ -0.2
TSSC4-210ENST00000496468 BOLA2-SMG1P6H3BVE0 249 aa13.82□□□□□ -0.2
TSSC4-210ENST00000496468 M6PRP20645 277 aa13.82□□□□□ -0.2
TSSC4-210ENST00000496468 RPL11P62913 178 aaKnown RBP13.82□□□□□ -0.2
TSSC4-210ENST00000496468 SERF2P84101 59 aa13.82□□□□□ -0.2
TSSC4-210ENST00000496468 MRPL32Q9BYC8 188 aaKnown RBP13.82□□□□□ -0.2
TSSC4-210ENST00000496468 ZMAT5Q9UDW3 170 aaKnown RBP13.82□□□□□ -0.2
TSSC4-210ENST00000496468 IGKV3-7A0A075B6H7 116 aa13.81□□□□□ -0.2
TSSC4-210ENST00000496468 TSPAN4O14817 238 aa13.81□□□□□ -0.2
TSSC4-210ENST00000496468 RAB2AP61019 212 aa13.81□□□□□ -0.2
TSSC4-210ENST00000496468 EGFEM1PQ0D2K5 195 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms