RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 C15orf53Q8NAA6 179 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 STXBP6Q8NFX7 210 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 TSPAN14Q8NG11 270 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 OR5H6Q8NGV6 325 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 OR6F1Q8NGZ6 308 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 OR4A16Q8NH70 328 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 NIPSNAP3BQ9BS92 247 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 ZNF2Q9BSG1 426 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 NRN1Q9NPD7 142 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 DIABLOQ9NR28 239 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 EHFQ9NZC4 300 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 MRPL36Q9P0J6 103 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 RRP15Q9Y3B9 282 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 RFNGQ9Y644 331 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 HLA-DRB4X5D2U9 266 aa3.57□□□□□ -1.84
R3HDM1-218ENST00000487294 NBDYA0A0U1RRE5 68 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 SMIM30A4D0T7 59 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 A8MTW9 85 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 SCGB2A1O75556 95 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 IGLC1P0CG04 106 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 S100GP29377 79 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 SDC2P34741 201 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 SNCAP37840 140 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 GABARAPL2P60520 117 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 RND3P61587 244 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 PSMG4Q5JS54 123 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 FAM222AQ5U5X8 452 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 SPATA31B1PQ5VZV4 182 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 WDR73Q6P4I2 378 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 UBE2DNLQ8IWF7 75 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 C6orf223Q8N319 242 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 ZNF709Q8N972 641 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 ZNRF2Q8NHG8 242 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 FCGR1BQ92637 280 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 NARS2Q96I59 477 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 FXYD6Q9H0Q3 95 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 SCRT2Q9NQ03 307 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 XCL2Q9UBD3 114 aa3.56□□□□□ -1.84
R3HDM1-218ENST00000487294 GSTZ1O43708 216 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 IGKV1-5P01602 117 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 SLC25A4P12235 298 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 PSMB9P28065 219 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 PPP5CP53041 499 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 PAX9P55771 341 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 DHRS2Q13268 280 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 ZNF79Q15937 498 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 PRSS54Q6PEW0 395 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 FOXI2Q6ZQN5 318 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 CROCCP3Q8IVE0 287 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 OR1S2Q8NGQ3 325 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 OR5H2Q8NGV7 314 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 OR52E5Q8NH55 327 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 RNASEH2CQ8TDP1 164 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 GPX8Q8TED1 209 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 Q8WTZ3 238 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 TMEM230Q96A57 120 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 MRGPRFQ96AM1 343 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 S100A16Q96FQ6 103 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 ZNF486Q96H40 463 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 YTHDF1Q9BYJ9 559 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 SAV1Q9H4B6 383 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 IFT46Q9NQC8 304 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 SSR3Q9UNL2 185 aa3.55□□□□□ -1.84
R3HDM1-218ENST00000487294 LYRM9A8MSI8 78 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 SOCS3O14543 225 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 B3GALNT1O75752 331 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 ATG12O94817 140 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 HBE1P02100 147 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 PMP2P02689 132 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 TSPOP30536 169 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 HRH1P35367 487 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 NUP62P37198 522 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 OPRK1P41145 380 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 HTR2BP41595 481 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 PSMB3P49720 205 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 RORCP51449 518 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 TAS2R20P59543 309 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 DHODHQ02127 395 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 USF2Q15853 346 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 TIGITQ495A1 244 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 PHLDA2Q53GA4 152 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 C2orf83Q53S99 150 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 UBE2NLQ5JXB2 153 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 C1orf194Q5T5A4 169 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 IDNKQ5T6J7 187 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 GDF5OSQ5U4N7 250 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 SAMD13Q5VXD3 122 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 GSG1LQ6UXU4 331 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 SIGLEC15Q6ZMC9 328 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 LHFPL1Q86WI0 220 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 C1orf158Q8N1D5 194 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 SLC35G3Q8N808 338 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 SLC24A4Q8NFF2 622 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 SCPEP1Q9HB40 452 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 CACFD1Q9UGQ2 172 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 GOLT1BQ9Y3E0 138 aa3.54□□□□□ -1.84
R3HDM1-218ENST00000487294 TMED3Q9Y3Q3 217 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms