RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 GUK1Q16774 197 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 TIGITQ495A1 244 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 TM4SF20Q53R12 229 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 Q6ZRG5 221 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 CYP2G1PQ6ZSU1 146 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 HAPLN4Q86UW8 402 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 WFDC3Q8IUB2 231 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 STXBP6Q8NFX7 210 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 OR11H7Q8NGC8 314 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 OR1L4Q8NGR5 311 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 OR2G3Q8NGZ4 309 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 DCANP1Q8TF63 244 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 ACY3Q96HD9 319 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 ATP5SQ99766 215 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 PSMG3Q9BT73 122 aaPredicted RBP3.81□□□□□ -1.8
HDAC6-223ENST00000480525 SHANK2-AS3Q9BTD1 123 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 MRPL32Q9BYC8 188 aaKnown RBP3.81□□□□□ -1.8
HDAC6-223ENST00000480525 NRN1Q9NPD7 142 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 TP53TG1Q9Y2A0 90 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 LSM5Q9Y4Y9 91 aaKnown RBP3.81□□□□□ -1.8
HDAC6-223ENST00000480525 HSPB11Q9Y547 144 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 IGSF23A1L1A6 192 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 ZNF98A6NK75 572 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 A8MTW9 85 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 H3BP45 60 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 H3BRN7 92 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 SOCS3O14543 225 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 AGPAT2O15120 278 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 HYPMO75409 117 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 YIF1AO95070 293 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 LINC00869P0C866 280 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 RPL12P30050 165 aaKnown RBP3.8□□□□□ -1.8
HDAC6-223ENST00000480525 GALR1P47211 349 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 CAMLGP49069 296 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 PSMB3P49720 205 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 S100A10P60903 97 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 SNRPD3P62318 126 aaKnown RBP3.8□□□□□ -1.8
HDAC6-223ENST00000480525 ZNF90Q03938 601 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 ARL16Q0P5N6 197 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 OR2F1Q13607 317 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 HIST2H2BDQ6DRA6 164 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 BTNL8Q6UX41 500 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 SIGLEC15Q6ZMC9 328 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 Q6ZNX1 250 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 Q6ZWC4 215 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 OR5C1Q8NGR4 320 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 MRPL53Q96EL3 112 aaKnown RBP3.8□□□□□ -1.8
HDAC6-223ENST00000480525 TM2D3Q9BRN9 247 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 C20orf24Q9BUV8 137 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 GGTLC1Q9BX51 225 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 NPCDR1Q9BY65 106 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 WDR61Q9GZS3 305 aaKnown RBP3.8□□□□□ -1.8
HDAC6-223ENST00000480525 OR5AC2Q9NZP5 309 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 TMEM14CQ9P0S9 112 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 MBD2Q9UBB5 411 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 TNFSF18Q9UNG2 199 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 HIGD1AQ9Y241 93 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 S4R3C0 116 aa3.8□□□□□ -1.8
HDAC6-223ENST00000480525 AGRNO00468 2067 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 IGHV3-21A0A0B4J1V1 117 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 TRBV7-9A0A0J9YWB2 115 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 FAM24AA6NFZ4 105 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 OR11H12B2RN74 326 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 G3V3Q6 166 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 MRPS12O15235 138 aaKnown RBP3.79□□□□□ -1.8
HDAC6-223ENST00000480525 JTBO76095 146 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 CST7O76096 145 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 MBP02144 154 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 OR5G3P0C626 314 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 IGHV4-30-4P0DP06 118 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 SPP1P10451 314 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 B2MP61769 119 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 FCN2Q15485 313 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 ODF3L2Q3SX64 289 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 MORN3Q6PF18 240 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-223ENST00000480525 LCN15Q6UWW0 184 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 TCF24Q7RTU0 167 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 BPIFA4PQ86YQ2 179 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 TCTE3Q8IZS6 198 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 LYPD1Q8N2G4 141 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 INO80EQ8NBZ0 244 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-223ENST00000480525 MRAPQ8TCY5 172 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 GNPNAT1Q96EK6 184 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-223ENST00000480525 WDR89Q96FK6 387 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-223ENST00000480525 MGST2Q99735 147 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 SLC50A1Q9BRV3 221 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 SLC25A39Q9BZJ4 359 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-223ENST00000480525 ARV1Q9H2C2 271 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 MS4A6AQ9H2W1 248 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 HRH4Q9H3N8 390 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 DNAJC4Q9NNZ3 241 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 SLC39A9Q9NUM3 307 aa3.79□□□□□ -1.8
HDAC6-223ENST00000480525 IGHV3-35A0A0C4DH35 117 aa3.78□□□□□ -1.8
HDAC6-223ENST00000480525 A0A0D9SG52 128 aa3.78□□□□□ -1.8
HDAC6-223ENST00000480525 RNF222A6NCQ9 220 aa3.78□□□□□ -1.8
HDAC6-223ENST00000480525 IZUMO1RA6ND01 250 aa3.78□□□□□ -1.8
HDAC6-223ENST00000480525 CCNKO75909 580 aa3.78□□□□□ -1.8
HDAC6-223ENST00000480525 SIX6O95475 246 aa3.78□□□□□ -1.8
HDAC6-223ENST00000480525 IFNA5P01569 189 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms