RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 IGKV3-7A0A075B6H7 116 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 SNRPCP09234 159 aaKnown RBP5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 CD300EQ496F6 205 aaPredicted RBP5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 UTF1Q5T230 341 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 MALRD1Q5VYJ5 2156 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF407Q9C0G0 2248 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 COL6A6A6NMZ7 2263 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 PIEZO1Q92508 2521 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF646O15015 1829 aaPredicted RBP5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 RAMP3O60896 148 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 TMEM141Q96I45 108 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 DCTN5Q9BTE1 182 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 CHAC1Q9BUX1 264 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 C11orf68Q9H3H3 251 aaKnown RBP5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 DEPPQ9NTK1 212 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 LRRC37AA6NMS7 1700 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 PRSS46E5RG02 174 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 CRPP02741 224 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 CKS1BP61024 79 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 C5orf64Q2M2E5 130 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 GCSAMLQ5JQS6 135 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 J3KRW8 73 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 WFDC3Q8IUB2 231 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 C8orf31Q8N9H6 132 aa5.04□□□□□ -1.6
PRPF4B-205ENST00000480058 K7EP13 123 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 IGKV1D-33P01593 117 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 IGKV1-33P01594 117 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 IGLV3-1P01715 115 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 PAX9P55771 341 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 TMEM155Q4W5P6 130 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 TAF1P21675 1872 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 SPAARA0A1B0GVQ0 90 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 D6R8Y8 96 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 DEFB125Q8N687 156 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 LEAP2Q969E1 77 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 K7EP34 96 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 PRR20EP86478 221 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 PRR20CP86479 221 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 PRR20DP86480 221 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 PRR20BP86481 221 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 PRR20AP86496 221 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 CFAP161Q6P656 301 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 LYZL1Q6UWQ5 148 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF71Q9NQZ8 489 aaPredicted RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 TMEM14BQ9NUH8 114 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 USF3Q68DE3 2245 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 GREB1LQ9C091 1923 aaPredicted RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 MBD3L4A6NDZ8 208 aaPredicted RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 MBD3L3A6NE82 208 aaPredicted RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 MBD3L5A6NJ08 208 aaPredicted RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 K7EM74 188 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 SNAI2O43623 268 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 IGKV3-15P01624 115 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 CDKN1BP46527 198 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 RPL36AP83881 106 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 ZNF474Q6S9Z5 364 aaPredicted RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 NUP37Q8NFH4 326 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 MBD3L2Q8NHZ7 208 aaPredicted RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 RPL36ALQ969Q0 106 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 MCM3APO60318 1980 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 ABCA7Q8IZY2 2146 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 MLNRO43193 412 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 HTN1P15515 57 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 PRTN3P24158 256 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 DSCR9P59020 149 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 SPACA3Q8IXA5 215 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 Q8N8P6 123 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 TMEM75Q8N9X5 138 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 VGLL1Q99990 258 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 C20orf78Q9BR46 151 aa5.03□□□□□ -1.6
PRPF4B-205ENST00000480058 IGHV1-69DA0A0B4J2H0 117 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV1-8P0DP01 117 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 TFF2Q03403 129 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 PAX8Q06710 450 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 LCN12Q6JVE5 192 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 Q8TCH9 128 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 SIGLEC9Q9Y336 463 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 APELAP0DMC3 54 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 VWC2Q2TAL6 325 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 C2orf82Q6UX34 121 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 DTX2Q86UW9 622 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 PRSS22Q9GZN4 317 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 KLF12Q9Y4X4 402 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 THSD7AQ9UPZ6 1657 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 TRBV7-1A0A0A6YYK4 115 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 PMS2P5A8MQ11 134 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 F8VRH5 84 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV1-46P01743 117 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 CCL3L1P16619 93 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 SPINK2P20155 84 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 HGFACQ04756 655 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 C1QTNF4Q9BXJ3 329 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 MUC21A0A0G2JKD1 596 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 MUC21A0A140T8X8 626 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 H0YJW9 148 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 HAX1O00165 279 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 ACYP1P07311 99 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 KLF5Q13887 457 aaPredicted RBP5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 MUC21Q5SSG8 566 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 C9orf106Q8NAJ2 232 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms