RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 SELENOTP62341 195 aa14.32□□□□□ -0.12
USP11-205ENST00000467378 LAMTOR1Q6IAA8 161 aa14.32□□□□□ -0.12
USP11-205ENST00000467378 RBPMS2Q6ZRY4 209 aaKnown RBP14.32□□□□□ -0.12
USP11-205ENST00000467378 CITED4Q96RK1 184 aa14.32□□□□□ -0.12
USP11-205ENST00000467378 MGST2Q99735 147 aa14.32□□□□□ -0.12
USP11-205ENST00000467378 PBDC1Q9BVG4 233 aa14.32□□□□□ -0.12
USP11-205ENST00000467378 G3V3Q6 166 aa14.31□□□□□ -0.12
USP11-205ENST00000467378 TSPAN4O14817 238 aa14.31□□□□□ -0.12
USP11-205ENST00000467378 BMI1P35226 326 aa14.31□□□□□ -0.12
USP11-205ENST00000467378 EIF2B2P49770 351 aaKnown RBP14.31□□□□□ -0.12
USP11-205ENST00000467378 LYZP61626 148 aa14.31□□□□□ -0.12
USP11-205ENST00000467378 STPG3Q8N7X2 389 aa14.31□□□□□ -0.12
USP11-205ENST00000467378 OR2T35Q8NGX2 323 aa14.31□□□□□ -0.12
USP11-205ENST00000467378 SLC45A2Q9UMX9 530 aa14.31□□□□□ -0.12
USP11-205ENST00000467378 UBE2L5PA0A1B0GUS4 154 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 BUB3O43684 328 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 DFFBO76075 338 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 PLP1P60201 277 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 GUCA2BQ16661 112 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 C16orf54Q6UWD8 224 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 Q8N1Y9 231 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 NARS2Q96I59 477 aaKnown RBP14.3□□□□□ -0.12
USP11-205ENST00000467378 TMEM231Q9H6L2 316 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 STARD9Q9P2P6 4700 aa14.3□□□□□ -0.12
USP11-205ENST00000467378 HYDINQ4G0P3 5121 aa14.29□□□□□ -0.12
USP11-205ENST00000467378 CD5P06127 495 aa14.29□□□□□ -0.12
USP11-205ENST00000467378 TCF24Q7RTU0 167 aa14.29□□□□□ -0.12
USP11-205ENST00000467378 SPAG8Q99932 426 aaPredicted RBP14.29□□□□□ -0.12
USP11-205ENST00000467378 LINC00869P0C866 280 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 ORM2P19652 201 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 CAMLGP49069 296 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 CLINT1Q14677 625 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 ZNF546Q86UE3 836 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 GLMPQ8WWB7 406 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 GRAMD2BQ96HH9 432 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 AQP10Q96PS8 301 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 GGTLC1Q9BX51 225 aa14.28□□□□□ -0.12
USP11-205ENST00000467378 MPDU1O75352 247 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 JTBO76095 146 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 CD7P09564 240 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 FGF7P21781 194 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 PRR20EP86478 221 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 PRR20CP86479 221 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 PRR20DP86480 221 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 PRR20BP86481 221 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 PRR20AP86496 221 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 RAB31Q13636 194 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 OPCMLQ14982 345 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 PATE2Q6UY27 113 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 OR1B1Q8NGR6 318 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 ATP5SQ99766 215 aa14.27□□□□□ -0.13
USP11-205ENST00000467378 RPL29P47914 159 aaKnown RBP14.26□□□□□ -0.13
USP11-205ENST00000467378 NEURL2Q9BR09 285 aa14.26□□□□□ -0.13
USP11-205ENST00000467378 SMIM3Q9BZL3 60 aa14.26□□□□□ -0.13
USP11-205ENST00000467378 WDR61Q9GZS3 305 aaKnown RBP14.26□□□□□ -0.13
USP11-205ENST00000467378 WFDC1Q9HC57 220 aa14.26□□□□□ -0.13
USP11-205ENST00000467378 DOK5Q9P104 306 aa14.26□□□□□ -0.13
USP11-205ENST00000467378 PFDN2Q9UHV9 154 aa14.26□□□□□ -0.13
USP11-205ENST00000467378 TNFSF18Q9UNG2 199 aa14.26□□□□□ -0.13
USP11-205ENST00000467378 IGKV3-7A0A075B6H7 116 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 HYPMO75409 117 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 FRMD6-AS1P0C7T7 363 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 NUP62P37198 522 aaPredicted RBP14.25□□□□□ -0.13
USP11-205ENST00000467378 CD81P60033 236 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 PXDC1Q5TGL8 231 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 MIC13Q5XKP0 118 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 GTSCR1Q86UQ5 136 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 NPCDR1Q9BY65 106 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 ARL6Q9H0F7 186 aa14.25□□□□□ -0.13
USP11-205ENST00000467378 FXYD6-FXYD2A0A087WZ82 144 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 RNF222A6NCQ9 220 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 SMLR1H3BR10 107 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 C1orf194Q5T5A4 169 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 GBGT1Q8N5D6 347 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 PPP1R14BQ96C90 147 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 MS4A6AQ9H2W1 248 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 C19orf73Q9NVV2 129 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 HIGD1AQ9Y241 93 aa14.24□□□□□ -0.13
USP11-205ENST00000467378 HELTA6NFD8 242 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 OR4C46A6NHA9 309 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 ZNF98A6NK75 572 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 H3BRN7 92 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 OR5G3P0C626 314 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 AP2S1P53680 142 aaPredicted RBP14.23□□□□□ -0.13
USP11-205ENST00000467378 RPL11P62913 178 aaKnown RBP14.23□□□□□ -0.13
USP11-205ENST00000467378 PAFAH1B2P68402 229 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 SIGLEC15Q6ZMC9 328 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 TMEM37Q8WXS4 190 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 PARD6GQ9BYG4 376 aaPredicted RBP14.23□□□□□ -0.13
USP11-205ENST00000467378 SLC25A39Q9BZJ4 359 aaPredicted RBP14.23□□□□□ -0.13
USP11-205ENST00000467378 ARV1Q9H2C2 271 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 FBXL17Q9UF56 701 aa14.23□□□□□ -0.13
USP11-205ENST00000467378 TRAV2A0A0B4J234 112 aa14.22□□□□□ -0.13
USP11-205ENST00000467378 TFPI2P48307 235 aa14.22□□□□□ -0.13
USP11-205ENST00000467378 B2MP61769 119 aa14.22□□□□□ -0.13
USP11-205ENST00000467378 Q6ZRG5 221 aa14.22□□□□□ -0.13
USP11-205ENST00000467378 INO80EQ8NBZ0 244 aaPredicted RBP14.22□□□□□ -0.13
USP11-205ENST00000467378 ST6GAL2Q96JF0 529 aa14.22□□□□□ -0.13
USP11-205ENST00000467378 UHRF2Q96PU4 802 aa14.22□□□□□ -0.13
USP11-205ENST00000467378 SHANK2-AS3Q9BTD1 123 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms