RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SRP14P37108 136 aaKnown RBP14.37□□□□□ -0.11
COL9A3-205ENST00000466192 TIGITQ495A1 244 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 CENPWQ5EE01 88 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 TEX38Q6PEX7 206 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 GNG4P50150 75 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 LYZP61626 148 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 LBHQ53QV2 105 aaPredicted RBP14.37□□□□□ -0.11
COL9A3-205ENST00000466192 LEMD1Q68G75 181 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 KCNIP4Q6PIL6 250 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 FRZBQ92765 325 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 C7orf69Q9H7B7 122 aa14.37□□□□□ -0.11
COL9A3-205ENST00000466192 PPP5D1E7EU14 171 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 TSTD3H0UI37 97 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 IGKV1-17P01599 117 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 GPR61Q9BZJ8 451 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 SRD5A3Q9H8P0 318 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 S4R3C0 116 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 TENM4Q6N022 2769 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 A0A0U1RQK1 487 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 B4DSR2 109 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 SLC25A16P16260 332 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 PLP1P60201 277 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 OR5I1Q13606 314 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 OR10G8Q8NGN5 311 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 BLNKQ8WV28 456 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 HIF1ANQ9NWT6 349 aa14.36□□□□□ -0.11
COL9A3-205ENST00000466192 GGCTO75223 188 aaKnown RBP14.35□□□□□ -0.11
COL9A3-205ENST00000466192 TRGC1P0CF51 173 aa14.35□□□□□ -0.11
COL9A3-205ENST00000466192 STXBP6Q8NFX7 210 aa14.35□□□□□ -0.11
COL9A3-205ENST00000466192 PIFOQ8TCI5 191 aa14.35□□□□□ -0.11
COL9A3-205ENST00000466192 SOX21Q9Y651 276 aaPredicted RBP14.35□□□□□ -0.11
COL9A3-205ENST00000466192 LY96Q9Y6Y9 160 aa14.35□□□□□ -0.11
COL9A3-205ENST00000466192 RANP62826 216 aaKnown RBP14.34□□□□□ -0.11
COL9A3-205ENST00000466192 SGMS2Q8NHU3 365 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 HIGD1AQ9Y241 93 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 A0A096LNT2 108 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 SH2D7A6NKC9 451 aaPredicted RBP14.34□□□□□ -0.11
COL9A3-205ENST00000466192 PHOX2AO14813 284 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 GFI1BQ5VTD9 330 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 TMEM219Q86XT9 240 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 LINC00479Q96M42 142 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 C2orf88Q9BSF0 95 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 MEGF9Q9H1U4 602 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 ZANQ9Y493 2812 aa14.34□□□□□ -0.11
COL9A3-205ENST00000466192 NBPF19A0A087WUL8 3843 aa14.33□□□□□ -0.11
COL9A3-205ENST00000466192 AVPP01185 164 aa14.33□□□□□ -0.11
COL9A3-205ENST00000466192 ZNF329Q86UD4 541 aa14.33□□□□□ -0.11
COL9A3-205ENST00000466192 C5orf56Q8N8D9 126 aa14.33□□□□□ -0.11
COL9A3-205ENST00000466192 CSPG4Q6UVK1 2322 aa14.33□□□□□ -0.12
COL9A3-205ENST00000466192 SLC17A3O00476 420 aa14.33□□□□□ -0.12
COL9A3-205ENST00000466192 ATP6V0E1O15342 81 aa14.33□□□□□ -0.12
COL9A3-205ENST00000466192 BTF3P20290 206 aaKnown RBP14.33□□□□□ -0.12
COL9A3-205ENST00000466192 ERVFC1-1P60608 527 aa14.33□□□□□ -0.12
COL9A3-205ENST00000466192 OR5R1Q8NH85 324 aa14.33□□□□□ -0.12
COL9A3-205ENST00000466192 LINC01548A6NM66 108 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 NDUFB8O95169 186 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 NBEAP1P0C6P0 100 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 FOXL1Q12952 345 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 IMMP2LQ96T52 175 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 F8W735 103 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-205ENST00000466192 OR2J3O76001 311 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 GP9P14770 177 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
COL9A3-205ENST00000466192 SLC25A39Q9BZJ4 359 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-205ENST00000466192 APCP25054 2843 aa14.31□□□□□ -0.12
COL9A3-205ENST00000466192 DOPEY2Q9Y3R5 2298 aa14.31□□□□□ -0.12
COL9A3-205ENST00000466192 CR1P17927 2039 aa14.31□□□□□ -0.12
COL9A3-205ENST00000466192 H3BTX0 84 aa14.31□□□□□ -0.12
COL9A3-205ENST00000466192 ECSCRQ19T08 205 aa14.31□□□□□ -0.12
COL9A3-205ENST00000466192 PDZD11Q5EBL8 140 aa14.31□□□□□ -0.12
COL9A3-205ENST00000466192 IGF2BP2-AS1Q96M15 143 aa14.31□□□□□ -0.12
COL9A3-205ENST00000466192 ZNF320A2RRD8 509 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 PEX7O00628 323 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 GNG7O60262 68 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 FABP4P15090 132 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 MFAP4P55083 255 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 GNG5P63218 68 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 UNQ5815/PRO19632Q6UWF5 114 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 NHLRC2Q8NBF2 726 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 THYN1Q9P016 225 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 NAV2Q8IVL1 2488 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 TRAV34A0A0B4J273 112 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 PGPA6NDG6 321 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 IGLV2-8P01709 118 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 AMY1AP04745 511 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 TYMSP04818 313 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 MGST1P10620 155 aaKnown RBP14.3□□□□□ -0.12
COL9A3-205ENST00000466192 MYCNOSP40205 109 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 CNN1P51911 297 aaKnown RBP14.3□□□□□ -0.12
COL9A3-205ENST00000466192 RAB4BP61018 213 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 MAPK1IP1LQ8NDC0 245 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 FAM110DQ8TAY7 271 aaPredicted RBP14.3□□□□□ -0.12
COL9A3-205ENST00000466192 ZNF48Q96MX3 618 aaPredicted RBP14.3□□□□□ -0.12
COL9A3-205ENST00000466192 RNASE7Q9H1E1 156 aaKnown RBP14.3□□□□□ -0.12
COL9A3-205ENST00000466192 PRO1933Q9H354 126 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 C21orf62Q9NYP8 219 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 MRPL27Q9P0M9 148 aaKnown RBP14.3□□□□□ -0.12
COL9A3-205ENST00000466192 CDC42EP3Q9UKI2 254 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 MOB4Q9Y3A3 225 aa14.3□□□□□ -0.12
COL9A3-205ENST00000466192 TOMM40O96008 361 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms