RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 APOC3P02656 99 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 IL4P05112 153 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 VAMP2P63027 116 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 DLK1P80370 383 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 ATRAIDQ6UW56 229 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 ST8SIA2Q92186 375 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 RNF125Q96EQ8 232 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 RNF2Q99496 336 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 C12orf57Q99622 126 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 GGACTQ9BVM4 153 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 NMES1Q9C002 83 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 DNAH7Q8WXX0 4024 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 IGKV1D-37A0A075B6S9 117 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 FXYD6-FXYD2A0A087WZ82 144 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 RAB19A4D1S5 217 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 HELTA6NFD8 242 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 FAM74A7A6NL05 159 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 PMS2P5A8MQ11 134 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 ARPC5O15511 151 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 CD7P09564 240 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 PSG1P11464 419 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 S100A7P31151 101 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 MEOX2P50222 304 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 PAX9P55771 341 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 CMC4P56277 68 aaPredicted RBP8.88□□□□□ -0.99
VPS52-213ENST00000461743 PAFAH1B2P68402 229 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 AKR1C1Q04828 323 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 IL15RAQ13261 267 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 FAM74A3Q4VXF1 159 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 FAM90A2PQ658T7 463 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 TMEM144Q7Z5S9 345 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 OR10P1Q8NGE3 313 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 PHYHIPLQ96FC7 376 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 TUBA4BQ9H853 241 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 RABAC1Q9UI14 185 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 SLC45A2Q9UMX9 530 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 U3KQE9 123 aa8.88□□□□□ -0.99
VPS52-213ENST00000461743 TENM3Q9P273 2699 aa8.87□□□□□ -0.99
VPS52-213ENST00000461743 A0A0D9SG52 128 aa8.87□□□□□ -0.99
VPS52-213ENST00000461743 OR11H12B2RN74 326 aa8.87□□□□□ -0.99
VPS52-213ENST00000461743 P2RY1P47900 373 aa8.87□□□□□ -0.99
VPS52-213ENST00000461743 CYCSP99999 105 aaKnown RBP8.87□□□□□ -0.99
VPS52-213ENST00000461743 USF2Q15853 346 aaPredicted RBP8.87□□□□□ -0.99
VPS52-213ENST00000461743 TCF24Q7RTU0 167 aa8.87□□□□□ -0.99
VPS52-213ENST00000461743 C11orf1Q9H5F2 150 aa8.87□□□□□ -0.99
VPS52-213ENST00000461743 LYRM2Q9NU23 88 aaPredicted RBP8.87□□□□□ -0.99
VPS52-213ENST00000461743 LSM5Q9Y4Y9 91 aaKnown RBP8.87□□□□□ -0.99
VPS52-213ENST00000461743 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 IGHV3-49A0A0A0MS15 119 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 GOSR2O14653 212 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 METTL15P1P0C7V9 234 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 SMIM6P0DI80 62 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 RPL35P42766 123 aaKnown RBP8.86□□□□□ -0.99
VPS52-213ENST00000461743 AKR1D1P51857 326 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 S100A10P60903 97 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 SELENOTP62341 195 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 ZNF345Q14585 488 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 STX12Q86Y82 276 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 SVBPQ8N300 66 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 BPIFCQ8NFQ6 507 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 MFFQ9GZY8 342 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 SRD5A3Q9H8P0 318 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 MBD2Q9UBB5 411 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 FBXL17Q9UF56 701 aa8.86□□□□□ -0.99
VPS52-213ENST00000461743 IGHV3OR16-13A0A075B7E8 117 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 IGHV3-74A0A0B4J1X5 117 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 SMCO3A2RU48 225 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 BCL2L11O43521 198 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 DEDDO75618 318 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 DFFBO76075 338 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 SNAPINO95295 136 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
VPS52-213ENST00000461743 PET100P0DJ07 73 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 ZNF90Q03938 601 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 RAB32Q13637 225 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 C1orf194Q5T5A4 169 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 C16orf54Q6UWD8 224 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 LINC00322Q6ZN03 302 aaPredicted RBP8.85□□□□□ -0.99
VPS52-213ENST00000461743 KCNRGQ8N5I3 272 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 TM2D3Q9BRN9 247 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 ZMAT4Q9H898 229 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
VPS52-213ENST00000461743 CARHSP1Q9Y2V2 147 aaKnown RBP8.85□□□□□ -0.99
VPS52-213ENST00000461743 BUB3O43684 328 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 SIX6O95475 246 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 RLN2P04090 185 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 SULT1A1P50225 295 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 CAV2P51636 162 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 LYZP61626 148 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 HBG1P69891 147 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 HBG2P69892 147 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 SLC38A11Q08AI6 406 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 OR2F1Q13607 317 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 C10orf91Q5T1B1 145 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 SAMD13Q5VXD3 122 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 TEPPQ6URK8 271 aa8.84□□□□□ -0.99
VPS52-213ENST00000461743 NBEAL2Q6ZNJ1 2754 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms