RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MCRIP2Q9BUT9 160 aaKnown RBP7.73□□□□□ -1.17
UPF2-204ENST00000460569 SH3BGRL3Q9H299 93 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 MRPL27Q9P0M9 148 aaKnown RBP7.73□□□□□ -1.17
UPF2-204ENST00000460569 HIGD1AQ9Y241 93 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 TIMM9Q9Y5J7 89 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 RFNGQ9Y644 331 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 ANK2Q01484 3957 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 IGHV3-66A0A0C4DH42 116 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 APOHP02749 345 aaPredicted RBP7.72□□□□□ -1.17
UPF2-204ENST00000460569 IGLL1P15814 213 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 C4BPBP20851 252 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 CRYBB3P26998 211 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 BMI1P35226 326 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 PLP1P60201 277 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 LAMTOR1Q6IAA8 161 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 IL34Q6ZMJ4 242 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 ADAMTSL5Q6ZMM2 481 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 OR1L4Q8NGR5 311 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 ST8SIA2Q92186 375 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 GNPNAT1Q96EK6 184 aaPredicted RBP7.72□□□□□ -1.17
UPF2-204ENST00000460569 PFDN5Q99471 154 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 PSMG3Q9BT73 122 aaPredicted RBP7.72□□□□□ -1.17
UPF2-204ENST00000460569 RHPN1-AS1Q9BWJ2 59 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 ARV1Q9H2C2 271 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 TMEM231Q9H6L2 316 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 SMPXQ9UHP9 88 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 PFDN2Q9UHV9 154 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 SELENOKQ9Y6D0 94 aa7.72□□□□□ -1.17
UPF2-204ENST00000460569 A0A1W2PS18 150 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 H3BRN7 92 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 CHEK1O14757 476 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 C8orf88P0DMB2 117 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 TPT1P13693 172 aaKnown RBP7.71□□□□□ -1.18
UPF2-204ENST00000460569 S100A7P31151 101 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 EIF5AP63241 154 aaKnown RBP7.71□□□□□ -1.18
UPF2-204ENST00000460569 GCSAMLQ5JQS6 135 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 C10orf113Q5VZT2 155 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 PATE2Q6UY27 113 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 S100A7AQ86SG5 101 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 GRAMD2BQ96HH9 432 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 UHRF2Q96PU4 802 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 SCRT1Q9BWW7 348 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 SLC25A39Q9BZJ4 359 aaPredicted RBP7.71□□□□□ -1.18
UPF2-204ENST00000460569 GPR61Q9BZJ8 451 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 SLC25A32Q9H2D1 315 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 SLC25A22Q9H936 323 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 SIGLEC8Q9NYZ4 499 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 MLXQ9UH92 298 aa7.71□□□□□ -1.18
UPF2-204ENST00000460569 ELOA3CA0A087WX78 387 aaPredicted RBP7.7□□□□□ -1.18
UPF2-204ENST00000460569 INSL3P51460 131 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 ACOT6Q3I5F7 207 aaPredicted RBP7.7□□□□□ -1.18
UPF2-204ENST00000460569 LINC00305Q7Z4B0 112 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 OR2G3Q8NGZ4 309 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 TMEM37Q8WXS4 190 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 SHANK2-AS3Q9BTD1 123 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 VSIRQ9H7M9 311 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 DNAJC4Q9NNZ3 241 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 TECRQ9NZ01 308 aaKnown RBP7.7□□□□□ -1.18
UPF2-204ENST00000460569 U3KQE9 123 aa7.7□□□□□ -1.18
UPF2-204ENST00000460569 ZNF98A6NK75 572 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 BUB3O43684 328 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 IGLV1-51P01701 117 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 SPP1P10451 314 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 RAB2AP61019 212 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 SERF2P84101 59 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 DEFB114Q30KQ6 69 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 CD300EQ496F6 205 aaPredicted RBP7.69□□□□□ -1.18
UPF2-204ENST00000460569 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 FAM78BQ5VT40 261 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 LEMD1Q68G75 181 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 C16orf54Q6UWD8 224 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 TCF24Q7RTU0 167 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 SLC51BQ86UW2 128 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 BAP18Q8IXM2 172 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 OR8I2Q8N0Y5 310 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 STOML3Q8TAV4 291 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 GATAD1Q8WUU5 269 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 RNF2Q99496 336 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 BOLA1Q9Y3E2 137 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 NOTCH3Q9UM47 2321 aa7.69□□□□□ -1.18
UPF2-204ENST00000460569 IGKV3-7A0A075B6H7 116 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 MBP02144 154 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 M6PRP20645 277 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 RHOBP62745 196 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 RPL11P62913 178 aaKnown RBP7.68□□□□□ -1.18
UPF2-204ENST00000460569 AKR1C8PQ5T2L2 129 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 C1orf194Q5T5A4 169 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 MORN5Q5VZ52 161 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 SPATA31B1PQ5VZV4 182 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 LCN12Q6JVE5 192 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 FAM122CQ6P4D5 195 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 SIGLEC15Q6ZMC9 328 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 RBPMS2Q6ZRY4 209 aaKnown RBP7.68□□□□□ -1.18
UPF2-204ENST00000460569 TMEM61Q8N0U2 210 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 OR10G4Q8NGN3 311 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 OR10G9Q8NGN4 311 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 OR10G7Q8NGN6 311 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 OR2K2Q8NGT1 345 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 TMED6Q8WW62 240 aa7.68□□□□□ -1.18
UPF2-204ENST00000460569 GLMPQ8WWB7 406 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms