RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 IGHV1-46P01743 117 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 HLA-DQB1P01920 261 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 ADRA2AP08913 450 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR5AC1P0C628 307 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF705DP0CH99 300 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 BLVRBP30043 206 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 CA5AP35218 305 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 POLR2HP52434 150 aaKnown RBP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 PIGPP57054 158 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 RPS11P62280 158 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 HBA1P69905 142 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR8B8Q15620 311 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 MORN2Q502X0 79 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 GPHB5Q86YW7 130 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 LRRC18Q8N456 261 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 C10orf126Q8N4M7 172 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 SLC25A40Q8TBP6 338 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 CIRBP-AS1Q8TBR5 109 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF799Q96GE5 643 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 ERMAPQ96PL5 475 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 C11orf68Q9H3H3 251 aaKnown RBP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF355PQ9NSJ1 428 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 MED11Q9P086 117 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 MGAQ8IWI9 3026 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 CREBBPQ92793 2442 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 IGSF9BQ9UPX0 1349 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 COL4A2P08572 1712 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 A0A096LNJ9 63 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 DUXBA0A1W2PPF3 345 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF98A6NK75 572 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 C5orf58C9J3I9 102 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 BET1O15155 118 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 PLA2G10O15496 165 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 BANF1O75531 89 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 NDUFB2O95178 105 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 SMIM17P0DL12 118 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 LPAR6P43657 344 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 DEFA1P59665 94 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 BSPH1Q075Z2 132 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 LTC4SQ16873 150 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 RPL22L1Q6P5R6 122 aaKnown RBP2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 PRSS54Q6PEW0 395 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 SLC25A34Q6PIV7 304 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 LINC01551Q86U37 167 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 KRTAP11-1Q8IUC1 163 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 TMEM86AQ8N2M4 240 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 C3orf22Q8N5N4 141 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR10D4PQ8NGN7 298 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR4K13Q8NH42 304 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 ISOC1Q96CN7 298 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 FOPNLQ96NB1 174 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 SEC22CQ9BRL7 303 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR2J1Q9GZK6 312 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR2D2Q9H210 308 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 RPUSD1Q9UJJ7 312 aaKnown RBP2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF222Q9UK12 451 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 CYSLTR1Q9Y271 337 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 AMMECR1Q9Y4X0 333 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 CELSR1Q9NYQ6 3014 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 SDK1Q7Z5N4 2213 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 KIAA1549LQ6ZVL6 1849 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 TNRC6BQ9UPQ9 1833 aaKnown RBP2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 SPENQ96T58 3664 aaKnown RBP2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 LRBAP50851 2863 aa2.39□□□□□ -2.03
HMGB1P15-201ENST00000453854 CEP192Q8TEP8 1941 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 BOD1L1Q8NFC6 3051 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 ASCC3Q8N3C0 2202 aaKnown RBP2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 THADAQ6YHU6 1953 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 C5orf67F2Z3F1 127 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 C1QCP02747 245 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 MPC1LP0DKB6 136 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 NTF3P20783 257 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BOP23527 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 NPPCP23582 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BBP33778 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 MPV17P39210 176 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 CCR2P41597 374 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 RAB13P51153 203 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BDP58876 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BCP62807 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 CCL20P78556 96 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF616Q08AN1 781 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 BAMBIQ13145 260 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST2H2BEQ16778 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 CROCCP2Q86T23 111 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 EXOC3-AS1Q8N2X6 119 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 RPRMLQ8N4K4 120 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 OR51T1Q8NGJ9 327 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 LMX1AQ8TE12 382 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 CANT1Q8WVQ1 401 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BHQ93079 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BNQ99877 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 HIST1H2BMQ99879 126 aa2.38□□□□□ -2.03
HMGB1P15-201ENST00000453854 C2orf88Q9BSF0 95 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms