RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 IZUMO1RA6ND01 250 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 C17orf51A8MQB3 221 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 F8W1H4 67 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 SYS1-DBNDD2H3BUS1 97 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 H3BUT2 72 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 NUPR1O60356 82 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 MPZL1O95297 269 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 CA1P00915 261 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGKV1D-16P01601 117 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 CT62P0C5K7 136 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 COX8AP10176 69 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 BCL3P20749 454 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 GATA2P23769 480 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 OTX2P32243 289 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 SSTR5P35346 364 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 PTGDSP41222 190 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 RBM11P57052 281 aaKnown RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 FBXW4P57775 412 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 TAS2R45P59539 299 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGLV3-21P80748 117 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 NNATQ16517 81 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 TIMM23BQ5SRD1 257 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 IBA57Q5T440 356 aaKnown RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 PLCXD3Q63HM9 321 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 TMEM14EPQ6UXP3 125 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 DGAT2L6Q6ZPD8 337 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 ERASQ7Z444 233 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 ATOH7Q8N100 152 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 GAPTQ8N292 157 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 RPP25LQ8N5L8 163 aaKnown RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 TTC9CQ8N5M4 171 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR51H1Q8NH63 302 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR10D3Q8NH80 312 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR1L1Q8NH94 360 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 RFESDQ8TAC1 157 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 TM4SF19Q96DZ7 209 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 GPR82Q96P67 336 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 ANAPC13Q9BS18 74 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 GGTLC1Q9BX51 225 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 VSIRQ9H7M9 311 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 BOKQ9UMX3 212 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 SLC17A4Q9Y2C5 497 aa3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 TSSC4Q9Y5U2 329 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 TDRD6O60522 2096 aaKnown RBP3.38□□□□□ -1.87
HMGB1P16-201ENST00000447155 ATG2BQ96BY7 2078 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 ABCA7Q8IZY2 2146 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 TRAV8-6A0A0B4J262 113 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 CCL15-CCL14A0A0B4J2E2 113 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 FAM231BA6NCW3 169 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 HELTA6NFD8 242 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR2J3O76001 311 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR7C1O76099 320 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 TSPAN13O95857 204 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGLV3-1P01715 115 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 ARL14EPLP0DKL9 152 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 MGST1P10620 155 aaKnown RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 FKBP2P26885 142 aaKnown RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OPRK1P41145 380 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 CSN1S1P47710 185 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 ATP5G3P48201 142 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 MLF1P58340 268 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 RPL31P62899 125 aaKnown RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 PSG4Q00888 419 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 KLRD1Q13241 179 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 SRSF6Q13247 344 aaKnown RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 CCL15Q16663 113 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 CENPWQ5EE01 88 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OTPQ5XKR4 325 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF818PQ6ZRF7 136 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 SHISA6Q6ZSJ9 500 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 Q6ZVH6 145 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 ANKRD37Q7Z713 158 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 UBALD2Q8IYN6 164 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 WDR31Q8NA23 367 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR2Z1Q8NG97 314 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR52E5Q8NH55 327 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR1F12Q8NHA8 337 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 H1FXQ92522 213 aaKnown RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 NAT6Q93015 286 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 GALMQ96C23 342 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR4C12Q96R67 309 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 HDHD3Q9BSH5 251 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 NPVFQ9HCQ7 196 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 CLCF1Q9UBD9 225 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 JPT1Q9UK76 154 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 ERG28Q9UKR5 140 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 YTHDF2Q9Y5A9 579 aaKnown RBP3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 RFNGQ9Y644 331 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 LHFPL6Q9Y693 200 aa3.37□□□□□ -1.87
HMGB1P16-201ENST00000447155 ARHGAP21Q5T5U3 1957 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 LTBP2Q14767 1821 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGKV1-9A0A0C4DH69 117 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF816-ZNF321PA0A0X1KG74 233 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 A0A1B0GW15 77 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 SMIM27A0A1W2PRY6 76 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 F2Z2F3 143 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 G3V3Y1 287 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms