RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 C17orf112F2Z3M2 114 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CCDC179H3BU77 68 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SERF1AO75920 110 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CA2P00918 260 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 IGHG2P01859 326 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 IGHV4-38-2P0DP08 117 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TAS2R46P59540 309 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CACNG7P62955 275 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 MPV17L2Q567V2 206 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CENPWQ5EE01 88 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 Q5XG85 94 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 GGNQ86UU5 652 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 NUP35Q8NFH5 326 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 FGF14Q92915 247 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ST20Q9HBF5 79 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 RPUSD1Q9UJJ7 312 aaKnown RBP4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 KLK13Q9UKR3 277 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 IGHV4-61A0A0C4DH41 118 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 A0A1B0GXF2 115 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 J3QQQ9 107 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PDCD6O75340 191 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 IGHV4-59P01825 116 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 STATHP02808 62 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ZNF728P0DKX0 622 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 OPRM1P35372 400 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 RBMXP38159 391 aaKnown RBP4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 LOXL1Q08397 574 aaPredicted RBP4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 OR5D14Q8NGL3 314 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 FAM19A4Q96LR4 140 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CARD19Q96LW7 228 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ARHGEF17Q96PE2 2063 aaPredicted RBP4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 BCL2L10Q9HD36 194 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 RARRES3Q9UL19 164 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TP53TG3Q9ULZ0 132 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 IER3IP1Q9Y5U9 82 aa4.59□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 REV3LO60673 3130 aa4.59□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 MUC21A0A0G2JKD1 596 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 MUC21A0A140T8X8 626 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 HMGN2P05204 90 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 LINC00869P0C866 280 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 CRISP2P16562 243 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 IL3RAP26951 378 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 SEC11AP67812 179 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 ZNF117Q03924 483 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 EIF3IQ13347 325 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 HES1Q14469 280 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 MUC21Q5SSG8 566 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 SLC48A1Q6P1K1 146 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 LY6G5BQ8NDX9 201 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 RFESDQ8TAC1 157 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 LRRC29Q8WV35 223 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 FAM3DQ96BQ1 224 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 GNPNAT1Q96EK6 184 aaPredicted RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 WFDC6Q9BQY6 131 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 AICDAQ9GZX7 198 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 FGF22Q9HCT0 170 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 PROCRQ9UNN8 238 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 LOC100131303A0A0U1RQF7 123 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 TEX48A0A1B0GUV7 120 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 RBMY1BA6NDE4 496 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 RBMY1EA6NEQ0 496 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 H3BRM9 83 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 LINC01565O15544 149 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 LMX1BO60663 402 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 RBMY1DP0C7P1 496 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 RBMY1A1P0DJD3 496 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 CCL1P22362 96 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 PEBP1P30086 187 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 ZNF93P35789 620 aaPredicted RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 RPL23P62829 140 aaKnown RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 KIAA1644Q3SXP7 199 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 LCN15Q6UWW0 184 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 ATP5L2Q7Z4Y8 100 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 BAGE3Q86Y29 109 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 BAGE2Q86Y30 109 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 ZFP62Q8NB50 900 aaPredicted RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 OR4A5Q8NH83 315 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 CNRIP1Q96F85 164 aaPredicted RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 SPANXDQ9BXN6 97 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 ZNF443Q9Y2A4 671 aaPredicted RBP4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 UNC80Q8N2C7 3258 aa4.58□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 SCN2AQ99250 2005 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 KNL1Q8NG31 2342 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 TRAV9-1A0A075B6T8 112 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 C4orf51C9J302 202 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 C3orf79P0CE67 100 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 FXYD6P3P58550 94 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 OR5H2Q8NGV7 314 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 BORCS8Q96FH0 119 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 NMNAT3Q96T66 252 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 SMIM7Q9BQ49 75 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 MRPL20Q9BYC9 149 aaKnown RBP4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 FANCMQ8IYD8 2048 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 NCKAP5O14513 1909 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 BRWD1Q9NSI6 2320 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 IGHV4OR15-8A0A075B7B6 117 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 PITX3O75364 302 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 KRASP01116 189 aa4.57□□□□□ -1.68
ALMS1-IT1-201ENST00000441587 IL9P15248 144 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms