RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 METTL21EPA6NDL7 271 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 SLC17A2O00624 439 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 CRXO43186 299 aaPredicted RBP4.17□□□□□ -1.74
SDCBP-203ENST00000424270 CCNKO75909 580 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 IGHV3-53P01767 116 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 RD3LP0DJH9 198 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 FCGR1AP12314 374 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 GYPEP15421 78 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 DTYMKP23919 212 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 OR10J1P30954 320 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 GNG2P59768 71 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 HERV-K104P61576 105 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
SDCBP-203ENST00000424270 TDRG1Q3Y452 100 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 Q6ZS49 121 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 H2BFWTQ7Z2G1 175 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 IQCF2Q8IXL9 164 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 OR8I2Q8N0Y5 310 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 OR51G1Q8NGK1 321 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 OR4X1Q8NH49 305 aa4.17□□□□□ -1.74
SDCBP-203ENST00000424270 RNASE8Q8TDE3 154 aaKnown RBP4.17□□□□□ -1.74
SDCBP-203ENST00000424270 AK6Q9Y3D8 172 aaKnown RBP4.17□□□□□ -1.74
SDCBP-203ENST00000424270 TRGV1A0A0A0MS02 117 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 A0A0D9SG52 128 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 TMEM272A0A1B0GTI8 110 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 TMEM235A6NFC5 223 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 H7BYZ3 331 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 CASQ2O14958 399 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-203ENST00000424270 PPYP01298 95 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 IGKV1-17P01599 117 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 CALB2P22676 271 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 F2RP25116 425 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 RND2P52198 227 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 FGL1Q08830 312 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 ARL6IP1Q15041 203 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 MLANAQ16655 118 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 AMTNQ6UX39 209 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 ZNF818PQ6ZRF7 136 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 Q6ZTI0 123 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 ZNF738Q8NE65 137 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 FCAMRQ8WWV6 532 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 BORCS5Q969J3 196 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 TMEM80Q96HE8 168 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 ATG5Q9H1Y0 275 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 MRPS18AQ9NVS2 196 aaKnown RBP4.16□□□□□ -1.74
SDCBP-203ENST00000424270 MRPL36Q9P0J6 103 aaKnown RBP4.16□□□□□ -1.74
SDCBP-203ENST00000424270 ANXA10Q9UJ72 324 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 RPH3ALQ9UNE2 315 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 DIMT1Q9UNQ2 313 aaKnown RBP4.16□□□□□ -1.74
SDCBP-203ENST00000424270 AP4S1Q9Y587 144 aa4.16□□□□□ -1.74
SDCBP-203ENST00000424270 E5RGE8 158 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 EI24O14681 340 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 PRAF2O60831 178 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 ZNF324O75467 553 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-203ENST00000424270 IGHV3-30P01768 117 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 IGHV3-33P01772 117 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 IGHV3-30-3P0DP02 117 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 GABRB1P18505 474 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 GALR1P47211 349 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 HSPA13P48723 471 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 MEOX2P50222 304 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 PPT1P50897 306 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 YPEL3P61236 119 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-203ENST00000424270 HSPE1P61604 102 aaKnown RBP4.15□□□□□ -1.75
SDCBP-203ENST00000424270 MSMO1Q15800 293 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 ZNF674Q2M3X9 581 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 CDNFQ49AH0 187 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 CT83Q5H943 113 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 MS4A15Q8N5U1 240 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 RHOXF1Q8NHV9 184 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 NUDCD2Q8WVJ2 157 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 ACY3Q96HD9 319 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 C20orf173Q96LM9 149 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 C8orf49Q96NF6 230 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 PRR13Q9NZ81 148 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 ELF5Q9UKW6 265 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-203ENST00000424270 FUT9Q9Y231 359 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 POMPQ9Y244 141 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 TNXBP22105 4242 aa4.15□□□□□ -1.75
SDCBP-203ENST00000424270 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 IGHV3-38A0A0C4DH36 116 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 SOCS3O14543 225 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 GYG2O15488 501 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 NOL3O60936 208 aaKnown RBP4.14□□□□□ -1.75
SDCBP-203ENST00000424270 OR5AC1P0C628 307 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 IGLC1P0CG04 106 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 PTHLHP12272 177 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 PSMB9P28065 219 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 S100GP29377 79 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 WNT4P56705 351 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 LYZP61626 148 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 SUPT4H1P63272 117 aaKnown RBP4.14□□□□□ -1.75
SDCBP-203ENST00000424270 WFDC2Q14508 124 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 PSG3Q16557 428 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 BAK1Q16611 211 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 MORN5Q5VZ52 161 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 IGFL4Q6B9Z1 124 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 WDR73Q6P4I2 378 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 C9orf47Q6ZRZ4 202 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms