RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ORM2P19652 201 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 FGF7P21781 194 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 CAMLGP49069 296 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 EIF2B2P49770 351 aaKnown RBP6.98□□□□□ -1.29
PDGFC-202ENST00000422544 RAB31Q13636 194 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 GUCA2BQ16661 112 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 LCN12Q6JVE5 192 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 RBPMS2Q6ZRY4 209 aaKnown RBP6.98□□□□□ -1.29
PDGFC-202ENST00000422544 ZNF546Q86UE3 836 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 BPIFCQ8NFQ6 507 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 OR1B1Q8NGR6 318 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 NARS2Q96I59 477 aaKnown RBP6.98□□□□□ -1.29
PDGFC-202ENST00000422544 VSIRQ9H7M9 311 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 WFDC1Q9HC57 220 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 DOK5Q9P104 306 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 U3KQE9 123 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 SORL1Q92673 2214 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 IGKV3-7A0A075B6H7 116 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 A0A1B0GVG6 124 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 DFFBO76075 338 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 LINC00869P0C866 280 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 BMI1P35226 326 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 NUP62P37198 522 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-202ENST00000422544 SELENOTP62341 195 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
PDGFC-202ENST00000422544 FAM90A2PQ658T7 463 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 LAMTOR1Q6IAA8 161 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 TCF24Q7RTU0 167 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 STPG3Q8N7X2 389 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 INO80EQ8NBZ0 244 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-202ENST00000422544 PPP1R14BQ96C90 147 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 AQP10Q96PS8 301 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 ATP5SQ99766 215 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 TMEM231Q9H6L2 316 aa6.97□□□□□ -1.29
PDGFC-202ENST00000422544 TRAV25A0A0B4J276 109 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 TSPAN4O14817 238 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 BUB3O43684 328 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 HYPMO75409 117 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 OR5G3P0C626 314 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 TFPI2P48307 235 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 AP2S1P53680 142 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-202ENST00000422544 MIC13Q5XKP0 118 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 C16orf54Q6UWD8 224 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 GBGT1Q8N5D6 347 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 GRAMD2BQ96HH9 432 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 ST6GAL2Q96JF0 529 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 GGTLC1Q9BX51 225 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 WDR61Q9GZS3 305 aaKnown RBP6.96□□□□□ -1.3
PDGFC-202ENST00000422544 ARL6Q9H0F7 186 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 FBXL17Q9UF56 701 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 PFDN2Q9UHV9 154 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 TNFSF18Q9UNG2 199 aa6.96□□□□□ -1.3
PDGFC-202ENST00000422544 RNF222A6NCQ9 220 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 K7EIL1 84 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 ARPC5O15511 151 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 MPDU1O75352 247 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 IFNA5P01569 189 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 CD7P09564 240 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 RPL29P47914 159 aaKnown RBP6.95□□□□□ -1.3
PDGFC-202ENST00000422544 PLP1P60201 277 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 OPCMLQ14982 345 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 PATE2Q6UY27 113 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 WFDC3Q8IUB2 231 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 Q8N1Y9 231 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 OR11H4Q8NGC9 324 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 SCGB1C1Q8TD33 95 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 SPAG8Q99932 426 aaPredicted RBP6.95□□□□□ -1.3
PDGFC-202ENST00000422544 NEURL2Q9BR09 285 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 NPCDR1Q9BY65 106 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 SLC39A9Q9NUM3 307 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 PXMP4Q9Y6I8 212 aa6.95□□□□□ -1.3
PDGFC-202ENST00000422544 ZNF98A6NK75 572 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 DNASE2O00115 360 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-202ENST00000422544 COX7A2P2O60397 106 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 CD5P06127 495 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 CD81P60033 236 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 B2MP61769 119 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 DEFB121Q5J5C9 76 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 PXDC1Q5TGL8 231 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 LEMD1Q68G75 181 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 Q6ZRG5 221 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 GTSCR1Q86UQ5 136 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 OR8I2Q8N0Y5 310 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 MRAPQ8TCY5 172 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 TMEM37Q8WXS4 190 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 UHRF2Q96PU4 802 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 SHANK2-AS3Q9BTD1 123 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 RSG1Q9BU20 258 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 SCRT1Q9BWW7 348 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 SLC25A39Q9BZJ4 359 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-202ENST00000422544 MFFQ9GZY8 342 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 ARV1Q9H2C2 271 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 MS4A6AQ9H2W1 248 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 SLC25A22Q9H936 323 aa6.94□□□□□ -1.3
PDGFC-202ENST00000422544 DNAJC4Q9NNZ3 241 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms