RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 WDR12Q9GZL7 423 aaKnown RBP11.99□□□□□ -0.49
LINC00404-201ENST00000418660 SACSQ9NZJ4 4579 aa11.99□□□□□ -0.49
LINC00404-201ENST00000418660 SMCO3A2RU48 225 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 SOCS3O14543 225 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 TSC22D2O75157 780 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 METTL15P1P0C7V9 234 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 ORM2P19652 201 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 S100A7P31151 101 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 PSMB3P49720 205 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 NUTF2P61970 127 aaKnown RBP11.98□□□□□ -0.49
LINC00404-201ENST00000418660 DLK1P80370 383 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 CYP2G1PQ6ZSU1 146 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 C11orf45Q8TAV5 145 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 ZNF431Q8TF32 576 aaPredicted RBP11.98□□□□□ -0.49
LINC00404-201ENST00000418660 TMEM147Q9BVK8 224 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 MFFQ9GZY8 342 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 NUDT15Q9NV35 164 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 RCL1Q9Y2P8 373 aaKnown RBP11.98□□□□□ -0.49
LINC00404-201ENST00000418660 KLK5Q9Y337 293 aaPredicted RBP11.98□□□□□ -0.49
LINC00404-201ENST00000418660 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
LINC00404-201ENST00000418660 ZNF98A6NK75 572 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 ZNF705EA8MWA4 302 aaPredicted RBP11.97□□□□□ -0.49
LINC00404-201ENST00000418660 FNDC10F2Z333 226 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 CCSO14618 274 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 CCNKO75909 580 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 MBPP02686 304 aaPredicted RBP11.97□□□□□ -0.49
LINC00404-201ENST00000418660 IL5P05113 134 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 H2AFB2P0C5Z0 115 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 GALR1P47211 349 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 ZNF846Q147U1 533 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 SAMD13Q5VXD3 122 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 Q8NAQ8 132 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 OR10P1Q8NGE3 313 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 LINC00052Q96N35 136 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 SEC22CQ9BRL7 303 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 C1QTNF4Q9BXJ3 329 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 NPVFQ9HCQ7 196 aa11.97□□□□□ -0.49
LINC00404-201ENST00000418660 FAM240BA0A1B0GVZ2 78 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 A6NHS1 94 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 ISLRO14498 428 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 DEFB4AO15263 64 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 MIFP14174 115 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 MEOX2P50222 304 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 RRAS2P62070 204 aaPredicted RBP11.96□□□□□ -0.49
LINC00404-201ENST00000418660 SELENOTP62341 195 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 C12orf45Q8N5I9 185 aaPredicted RBP11.96□□□□□ -0.49
LINC00404-201ENST00000418660 OR1B1Q8NGR6 318 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 PHLDA1Q8WV24 401 aaPredicted RBP11.96□□□□□ -0.49
LINC00404-201ENST00000418660 SLC25A32Q9H2D1 315 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 SAV1Q9H4B6 383 aaPredicted RBP11.96□□□□□ -0.49
LINC00404-201ENST00000418660 SLC25A22Q9H936 323 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 CLEC5AQ9NY25 188 aa11.96□□□□□ -0.49
LINC00404-201ENST00000418660 AGRNO00468 2067 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 IGHV4-28A0A0C4DH34 117 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 C7orf66A4D0T2 115 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 NANOS2P60321 138 aaKnown RBP11.95□□□□□ -0.5
LINC00404-201ENST00000418660 GDF5OSQ5U4N7 250 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 MZT2BQ6NZ67 158 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 GPR82Q96P67 336 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 RSG1Q9BU20 258 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 MGAT4CQ9UBM8 478 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 TBC1D24Q9ULP9 559 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 X6R8D5 127 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 DNAH1Q9P2D7 4330 aa11.95□□□□□ -0.5
LINC00404-201ENST00000418660 RYR2Q92736 4967 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 C5orf51A6NDU8 294 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 FAM25EA8MYX2 175 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 K7EPK0 472 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 RBMY1A1P0DJD3 496 aaKnown RBP11.94□□□□□ -0.5
LINC00404-201ENST00000418660 RBMY1CP0DJD4 496 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 PLP1P60201 277 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 RAP2BP61225 183 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 ASAH1Q13510 395 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 RBMY1FQ15415 496 aaKnown RBP11.94□□□□□ -0.5
LINC00404-201ENST00000418660 SPATA31B1PQ5VZV4 182 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 TEPPQ6URK8 271 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 GSG1LQ6UXU4 331 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 C16orf92Q96LL3 132 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 GGACTQ9BVM4 153 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 DOK5Q9P104 306 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 XCL2Q9UBD3 114 aa11.94□□□□□ -0.5
LINC00404-201ENST00000418660 H3BRN7 92 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 L7N2F9 121 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 HYPMO75409 117 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 DEDDO75618 318 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 LINC00869P0C866 280 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 DEFB1P60022 68 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 VAMP2P63027 116 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 ARL16Q0P5N6 197 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 LINC00476Q8WZB0 136 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 C2orf50Q96LR7 162 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 C17orf77Q96MU5 243 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 SHANK2-AS3Q9BTD1 123 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 SCRT1Q9BWW7 348 aa11.93□□□□□ -0.5
LINC00404-201ENST00000418660 SLC25A39Q9BZJ4 359 aaPredicted RBP11.93□□□□□ -0.5
LINC00404-201ENST00000418660 HRH4Q9H3N8 390 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms