RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ZNF705DP0CH99 300 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF705BP0CI00 300 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 TDGF1P13385 188 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 CRISP2P16562 243 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 MDKP21741 143 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 IL3RAP26951 378 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 CTRLP40313 264 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RPL29P47914 159 aaKnown RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 SSR4P51571 173 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 DLX1P56177 255 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 FXYD4P59646 89 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 FGF12P61328 243 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RHOBP62745 196 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF154Q13106 437 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF726P1Q15940 193 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RTL8BQ17RB0 113 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RSPO1Q2MKA7 263 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 MUC21Q5SSG8 566 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM78Q5T7P6 136 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 C1orf195Q5TG92 126 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 FAM78BQ5VT40 261 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 SAMD13Q5VXD3 122 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF705AQ6ZN79 300 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q6ZSR6 202 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 FAM231DQ6ZW35 169 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RPS19BP1Q86WX3 136 aaKnown RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 MKXQ8IYA7 352 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 GAPTQ8N292 157 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RPP25LQ8N5L8 163 aaKnown RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 SIGLECL1Q8N7X8 197 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF709Q8N972 641 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR10P1Q8NGE3 313 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR4P4Q8NGL7 312 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 CCL4L1Q8NHW4 92 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 NABP1Q96AH0 204 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RPUSD4Q96CM3 377 aaKnown RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 MRAP2Q96G30 205 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 SPACA5Q96QH8 159 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 VPS25Q9BRG1 176 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 PRORYQ9H606 182 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q9HAA7 133 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 CBLN4Q9NTU7 201 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 MED29Q9NX70 200 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 BET1LQ9NYM9 111 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 PSENENQ9NZ42 101 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 IL36BQ9NZH7 164 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 KCNIP1Q9NZI2 227 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ST3GAL6Q9Y274 331 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR51B2Q9Y5P1 312 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 CACNA1CQ13936 2221 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGHV2OR16-5A0A0B4J2B6 119 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGHV1-69-2A0A0G2JMI3 117 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 MDFIC2A0A1B0GVS7 189 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 A0A1B0GX78 115 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 NCBP2LA6PVI3 153 aaKnown RBP2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 CD300LBA8K4G0 201 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 C11orf94C9JXX5 98 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 F5H5K5 113 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF253O75346 499 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 CXorf1O96002 111 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 HLA-DQA1P01909 254 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 GPX1P07203 203 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 OPRM1P35372 400 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 LHX2P50458 406 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 CKS1BP61024 79 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ARG2P78540 354 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 RHOGP84095 191 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 RPL18AQ02543 176 aaKnown RBP2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 SLC38A11Q08AI6 406 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGFBP7Q16270 282 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 PSMG4Q5JS54 123 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 C9orf66Q5T8R8 295 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGFL2Q6UWQ7 119 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 LCN15Q6UWW0 184 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF818PQ6ZRF7 136 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q8IYB0 196 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR2M3Q8NG83 312 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR5A2Q8NGI9 324 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR1L8Q8NGR8 309 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 TYMSOSQ8TAI1 123 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ARPC1AQ92747 370 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 EEF1AKMT3Q96AZ1 226 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 GPR146Q96CH1 333 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 REEP6Q96HR9 211 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 LINC00477Q96M19 166 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR4C12Q96R67 309 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 HDHD3Q9BSH5 251 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 C19orf24Q9BVV8 132 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 SFXN3Q9BWM7 321 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 VSIRQ9H7M9 311 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF442Q9H7R0 627 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZDHHC11Q9H8X9 412 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ENY2Q9NPA8 101 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF581Q9P0T4 197 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF256Q9Y2P7 627 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 LAMTOR2Q9Y2Q5 125 aa2.75□□□□□ -1.97
HMGB3P23-201ENST00000414981 LRP4O75096 1905 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1-27A0A075B6S5 117 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 TRGV10A0A0A0MS01 117 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGHV2-26A0A0B4J1V2 119 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms