RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 IGHV3OR16-8A0A075B7F1 116 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 C7orf66A4D0T2 115 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 SMIM9A6NGZ8 99 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 PMS2P5A8MQ11 134 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 GOSR2O14653 212 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 HYPMO75409 117 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 MBPP02686 304 aaPredicted RBP4.72□□□□□ -1.65
USP54-202ENST00000413442 APOHP02749 345 aaPredicted RBP4.72□□□□□ -1.65
USP54-202ENST00000413442 AMBPP02760 352 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 PET100P0DJ07 73 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 IAPPP10997 89 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 RPL7P18124 248 aaKnown RBP4.72□□□□□ -1.65
USP54-202ENST00000413442 PAX9P55771 341 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 DEFB131AP59861 70 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 B2MP61769 119 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 AKR1C1Q04828 323 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 IL15RAQ13261 267 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 USF2Q15853 346 aaPredicted RBP4.72□□□□□ -1.65
USP54-202ENST00000413442 Q6ZRG5 221 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 CYP2G1PQ6ZSU1 146 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 ACOT7LQ6ZUV0 252 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 ZNF546Q86UE3 836 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 LILRB2Q8N423 598 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 GBGT1Q8N5D6 347 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 STXBP6Q8NFX7 210 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 ASB13Q8WXK3 278 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 PPP1R14BQ96C90 147 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 RARRES2Q99969 163 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 NMES1Q9C002 83 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 MFFQ9GZY8 342 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 SLC25A31Q9H0C2 315 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 MAGT1Q9H0U3 335 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 RPRMQ9NS64 109 aa4.72□□□□□ -1.65
USP54-202ENST00000413442 PAIP2BQ9ULR5 123 aaKnown RBP4.72□□□□□ -1.65
USP54-202ENST00000413442 IGKV1OR2-108A0A075B7D4 117 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 IGHV3OR16-13A0A075B7E8 117 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 IGHV3-49A0A0A0MS15 119 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 IGHV3-74A0A0B4J1X5 117 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 ZNF98A6NK75 572 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 INMT-MINDY4F8WBC2 141 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 LCE2BO14633 110 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 SSSCA1O60232 199 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 DUSP14O95147 198 aaKnown RBP4.71□□□□□ -1.66
USP54-202ENST00000413442 MIFP14174 115 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 CXCL2P19875 107 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 TFPI2P48307 235 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 SULT1A1P50225 295 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 ZNF90Q03938 601 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 GUK1Q16774 197 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 EBLN2Q6P2I7 272 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 FOXI2Q6ZQN5 318 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 TRPT1Q86TN4 253 aaKnown RBP4.71□□□□□ -1.66
USP54-202ENST00000413442 STX12Q86Y82 276 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 OR1L4Q8NGR5 311 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 PFDN5Q99471 154 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 NEU1Q99519 415 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 PBDC1Q9BVG4 233 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 C11orf68Q9H3H3 251 aaKnown RBP4.71□□□□□ -1.66
USP54-202ENST00000413442 HRH4Q9H3N8 390 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 LYRM2Q9NU23 88 aaPredicted RBP4.71□□□□□ -1.66
USP54-202ENST00000413442 UBQLN2Q9UHD9 624 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 TBC1D24Q9ULP9 559 aa4.71□□□□□ -1.66
USP54-202ENST00000413442 IGKV3-7A0A075B6H7 116 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 TEX48A0A1B0GUV7 120 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 TMEM189A5PLL7 270 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 NUPR2A6NF83 97 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 FAM25EA8MYX2 175 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 E5RGE8 158 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 SCGB1D2O95969 90 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 METTL15P1P0C7V9 234 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 RPL29P47914 159 aaKnown RBP4.7□□□□□ -1.66
USP54-202ENST00000413442 BCAP31P51572 246 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 LYZP61626 148 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 BAXQ07812 192 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 VWC2Q2TAL6 325 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 BPIFA4PQ86YQ2 179 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 APRG1Q8IVJ8 170 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 DNAJC4Q9NNZ3 241 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 KCNIP2Q9NS61 270 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 UQCC1Q9NVA1 299 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 HIGD1AQ9Y241 93 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 WDR83OSQ9Y284 106 aa4.7□□□□□ -1.66
USP54-202ENST00000413442 KLK5Q9Y337 293 aaPredicted RBP4.7□□□□□ -1.66
USP54-202ENST00000413442 A0A087X0K7 114 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 IGHV3-66A0A0C4DH42 116 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 SMCO3A2RU48 225 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 ZNF705EA8MWA4 302 aaPredicted RBP4.69□□□□□ -1.66
USP54-202ENST00000413442 C11orf94C9JXX5 98 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 H3BMM0 161 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 AGPAT2O15120 278 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 PTTG1O95997 202 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 ZNF688P0C7X2 276 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 LINC00869P0C866 280 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 HLA-DRB4P13762 266 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 RPL35AP18077 110 aaKnown RBP4.69□□□□□ -1.66
USP54-202ENST00000413442 ORM2P19652 201 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 CAMLGP49069 296 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 CAV2P51636 162 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 PSMG4Q5JS54 123 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 NRARPQ7Z6K4 114 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms