RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TCF19Q9Y242 345 aa4.19□□□□□ -1.74
LINC00342-201ENST00000412393 UBE2J1Q9Y385 318 aaPredicted RBP4.19□□□□□ -1.74
LINC00342-201ENST00000412393 MRPS16Q9Y3D3 137 aaKnown RBP4.19□□□□□ -1.74
LINC00342-201ENST00000412393 HILPDAQ9Y5L2 63 aa4.19□□□□□ -1.74
LINC00342-201ENST00000412393 MINOS1-NBL1R4GNA1 71 aa4.19□□□□□ -1.74
LINC00342-201ENST00000412393 ODAMA1E959 279 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 ZNF705GA8MUZ8 300 aaPredicted RBP4.18□□□□□ -1.74
LINC00342-201ENST00000412393 F2RL2O00254 374 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 SLC33A1O00400 549 aaPredicted RBP4.18□□□□□ -1.74
LINC00342-201ENST00000412393 SYNGR2O43760 224 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 PGLYRP1O75594 196 aaPredicted RBP4.18□□□□□ -1.74
LINC00342-201ENST00000412393 MT3P25713 68 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 HTR1DP28221 377 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 RBM11P57052 281 aaKnown RBP4.18□□□□□ -1.74
LINC00342-201ENST00000412393 PDZD11Q5EBL8 140 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 PRAMEF5Q5TYX0 476 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 OR8G2PQ6IF36 304 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 ETFRF1Q6IPR1 90 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 LINC01551Q86U37 167 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 TMEM219Q86XT9 240 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 ABHD12Q8N2K0 398 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 KLHDC1Q8N7A1 406 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 C11orf44Q8N8P7 122 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 ZBTB34Q8NCN2 500 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 OR4B1Q8NGF8 309 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 OR5B3Q8NH48 314 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 FAM110DQ8TAY7 271 aaPredicted RBP4.18□□□□□ -1.74
LINC00342-201ENST00000412393 ZNF596Q8TC21 504 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 MRPL30Q8TCC3 161 aaKnown RBP4.18□□□□□ -1.74
LINC00342-201ENST00000412393 TOMM40LQ969M1 308 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 COQ2Q96H96 371 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 RNF2Q99496 336 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 PRSS22Q9GZN4 317 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 ZNF702PQ9H963 129 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 DNAJC4Q9NNZ3 241 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 DPM3Q9P2X0 92 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 ARL2-SNX15V9GYD0 113 aa4.18□□□□□ -1.74
LINC00342-201ENST00000412393 TRAV24A0A0B4J272 114 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 CEBPZOSA8MTT3 80 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 TMEM238C9JI98 176 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 HSPB6O14558 160 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 SSSCA1O60232 199 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 CST7O76096 145 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 KRASP01116 189 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 IGLV1-47P01700 117 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 MT-ND6P03923 174 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 OR10J4P0C629 311 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 P0C879 139 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 IL3RAP26951 378 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 PRRX1P54821 245 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 TPPP2P59282 170 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 TWIST1Q15672 202 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 TMEM183BQ1AE95 376 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 C17orf58Q2M2W7 97 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 PHLDA2Q53GA4 152 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 PDLIM3Q53GG5 364 aaPredicted RBP4.17□□□□□ -1.74
LINC00342-201ENST00000412393 OR10J3Q5JRS4 329 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 Q8N2B8 174 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 OR4P4Q8NGL7 312 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 TMEM37Q8WXS4 190 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 GPR146Q96CH1 333 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 SLC35E1Q96K37 410 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 OR4C12Q96R67 309 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 ATG101Q9BSB4 218 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 HDHD3Q9BSH5 251 aaPredicted RBP4.17□□□□□ -1.74
LINC00342-201ENST00000412393 GNB1LQ9BYB4 327 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 PARLQ9H300 379 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 KCNIP2Q9NS61 270 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 SERTAD4Q9NUC0 356 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 TMEM140Q9NV12 185 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 MRPL27Q9P0M9 148 aaKnown RBP4.17□□□□□ -1.74
LINC00342-201ENST00000412393 HSPB7Q9UBY9 170 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 ST3GAL6Q9Y274 331 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 OR2W1Q9Y3N9 320 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 RFNGQ9Y644 331 aa4.17□□□□□ -1.74
LINC00342-201ENST00000412393 KBTBD11-OT1A0A1B0GTJ5 212 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 ZFP92A6NM28 416 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 FAM90A9PA6NNJ1 464 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 PMS2P5A8MQ11 134 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 C9JCJ5 164 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 BUB1B-PAK6H3BSN5 160 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 J3QR06 171 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 K7ERU9 68 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 MPDU1O75352 247 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 OR7C1O76099 320 aaPredicted RBP4.16□□□□□ -1.74
LINC00342-201ENST00000412393 SCGB1D1O95968 90 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 GPX1P07203 203 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 CGB3P0DN86 165 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 CGB7P0DN87 165 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 CD24P25063 80 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 CEACAM3P40198 252 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 VDAC2P45880 294 aaPredicted RBP4.16□□□□□ -1.74
LINC00342-201ENST00000412393 REG1BP48304 166 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 UBE2G2P60604 165 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 BLCAPP62952 87 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 RHOGP84095 191 aa4.16□□□□□ -1.74
LINC00342-201ENST00000412393 RPL19P84098 196 aaKnown RBP4.16□□□□□ -1.74
LINC00342-201ENST00000412393 RUNX1Q01196 453 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms