RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FBXL17Q9UF56 701 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 EPPK1P58107 5090 aaKnown RBP12.86□□□□□ -0.35
LSM5-204ENST00000409909 H3BMM0 161 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 SCGB1D2O95969 90 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 CFDP00746 253 aaPredicted RBP12.86□□□□□ -0.35
LSM5-204ENST00000409909 NANOS2P60321 138 aaKnown RBP12.86□□□□□ -0.35
LSM5-204ENST00000409909 TMEM41BQ5BJD5 291 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 GDF5OSQ5U4N7 250 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 TMEM14EPQ6UXP3 125 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 TMEM144Q7Z5S9 345 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 OR8I2Q8N0Y5 310 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 Q8NAQ8 132 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 PPP1R14BQ96C90 147 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 C17orf77Q96MU5 243 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 CCDC32Q9BV29 185 aa12.86□□□□□ -0.35
LSM5-204ENST00000409909 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
LSM5-204ENST00000409909 CCSO14618 274 aa12.85□□□□□ -0.35
LSM5-204ENST00000409909 MBPP02686 304 aaPredicted RBP12.85□□□□□ -0.35
LSM5-204ENST00000409909 ORM2P19652 201 aa12.85□□□□□ -0.35
LSM5-204ENST00000409909 BPIFCQ8NFQ6 507 aa12.85□□□□□ -0.35
LSM5-204ENST00000409909 PHLDA1Q8WV24 401 aaPredicted RBP12.85□□□□□ -0.35
LSM5-204ENST00000409909 LINC00052Q96N35 136 aa12.85□□□□□ -0.35
LSM5-204ENST00000409909 SEC22CQ9BRL7 303 aa12.85□□□□□ -0.35
LSM5-204ENST00000409909 NUDT15Q9NV35 164 aa12.85□□□□□ -0.35
LSM5-204ENST00000409909 X6R8D5 127 aa12.85□□□□□ -0.35
LSM5-204ENST00000409909 SMCO3A2RU48 225 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 ZNF98A6NK75 572 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 ZNF705EA8MWA4 302 aaPredicted RBP12.84□□□□□ -0.35
LSM5-204ENST00000409909 METTL15P1P0C7V9 234 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
LSM5-204ENST00000409909 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
LSM5-204ENST00000409909 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
LSM5-204ENST00000409909 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 C11orf45Q8TAV5 145 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 SLC25A32Q9H2D1 315 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 SLC45A2Q9UMX9 530 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
LSM5-204ENST00000409909 IGHV4-28A0A0C4DH34 117 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 ID1P41134 155 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 PSMB3P49720 205 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 TAS2R30P59541 319 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 ARL16Q0P5N6 197 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 CYP2G1PQ6ZSU1 146 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 ZNF431Q8TF32 576 aaPredicted RBP12.83□□□□□ -0.36
LSM5-204ENST00000409909 LINC00476Q8WZB0 136 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 TBC1D24Q9ULP9 559 aa12.83□□□□□ -0.36
LSM5-204ENST00000409909 A6NHS1 94 aa12.82□□□□□ -0.36
LSM5-204ENST00000409909 TSC22D2O75157 780 aa12.82□□□□□ -0.36
LSM5-204ENST00000409909 DLK1P80370 383 aa12.82□□□□□ -0.36
LSM5-204ENST00000409909 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
LSM5-204ENST00000409909 SAV1Q9H4B6 383 aaPredicted RBP12.82□□□□□ -0.36
LSM5-204ENST00000409909 DOK5Q9P104 306 aa12.82□□□□□ -0.36
LSM5-204ENST00000409909 XCL2Q9UBD3 114 aa12.82□□□□□ -0.36
LSM5-204ENST00000409909 KLK5Q9Y337 293 aaPredicted RBP12.82□□□□□ -0.36
LSM5-204ENST00000409909 ISLRO14498 428 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 IGKV3-20P01619 116 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 IL5P05113 134 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 H2AFB2P0C5Z0 115 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 MIFP14174 115 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 OR10P1Q8NGE3 313 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 C20orf173Q96LM9 149 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 TMEM147Q9BVK8 224 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 SCRT1Q9BWW7 348 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 MFFQ9GZY8 342 aa12.81□□□□□ -0.36
LSM5-204ENST00000409909 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 FAM25EA8MYX2 175 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 FNDC10F2Z333 226 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 F6UB75 175 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 GALR1P47211 349 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 NUTF2P61970 127 aaKnown RBP12.8□□□□□ -0.36
LSM5-204ENST00000409909 FOXI2Q6ZQN5 318 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 C12orf45Q8N5I9 185 aaPredicted RBP12.8□□□□□ -0.36
LSM5-204ENST00000409909 S100ZQ8WXG8 99 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 SLC25A39Q9BZJ4 359 aaPredicted RBP12.8□□□□□ -0.36
LSM5-204ENST00000409909 NPVFQ9HCQ7 196 aa12.8□□□□□ -0.36
LSM5-204ENST00000409909 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
LSM5-204ENST00000409909 H3BRN7 92 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 K7EPK0 472 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 HYPMO75409 117 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 LINC00869P0C866 280 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 FXYD7P58549 80 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 PLP1P60201 277 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 ASAH1Q13510 395 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 ZNF846Q147U1 533 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 C16orf92Q96LL3 132 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 SHANK2-AS3Q9BTD1 123 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 C11orf1Q9H5F2 150 aa12.79□□□□□ -0.36
LSM5-204ENST00000409909 C5orf51A6NDU8 294 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 DEDDO75618 318 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 LY6G6CO95867 125 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 MEOX2P50222 304 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 SELENOTP62341 195 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms