RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 OR4F17Q8NGA8 305 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 BLNKQ8WV28 456 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 RNF125Q96EQ8 232 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 FANCD2OSQ96PS1 177 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 MLST8Q9BVC4 326 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ZNF492Q9P255 531 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 IGHV3-21A0A0B4J1V1 117 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 NDUFS8O00217 210 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ADMP35318 185 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 PDE6HQ13956 83 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 VN1R17PQ8TDU5 208 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 TBX15Q96SF7 602 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 KALRNO60229 2985 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 FASNP49327 2511 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 NDUFS7O75251 213 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 LTAP01374 205 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 AMY1AP04745 511 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 CRISP2P16562 243 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 UQCRFS1P47985 274 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 CMTM2Q8TAZ6 248 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 SERTAD4Q9NUC0 356 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 NAT8BQ9UHF3 227 aa13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 SOX21Q9Y651 276 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQB1-204ENST00000399084 FAM231BA6NCW3 169 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 SNURFLB1AK76 121 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 K7EQM0 130 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 CBLN1P23435 193 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 IER3P46695 156 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 USF2Q15853 346 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ASPHD1Q5U4P2 390 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ATP5L2Q7Z4Y8 100 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 NUDT10Q8NFP7 164 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 TSKUQ8WUA8 353 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 NUDT11Q96G61 164 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 LINC00479Q96M42 142 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 BPESC1Q9GZL8 116 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 C21orf62Q9NYP8 219 aa13.96□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ZFYVE26Q68DK2 2539 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 OR10J3Q5JRS4 329 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 Q8N9W7 124 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 GSX1Q9H4S2 264 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 C7orf69Q9H7B7 122 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 ZNF331Q9NQX6 463 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 TRBV19A0A075B6N1 114 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 SERTM2A0A1B0GWG4 89 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 C19orf84I3L1E1 186 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 HIVEP3Q5T1R4 2406 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 PRSS22Q9GZN4 317 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 GFRA4Q9GZZ7 299 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 ZNF586Q9NXT0 402 aa13.95□□□□□ -0.18
HLA-DQB1-204ENST00000399084 IGHV7-81A0A0B4J1V7 117 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 A0A1W2PRD5 423 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 A0A1W2PRF3 423 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 A0A1W2PRM7 423 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 FBLL1A6NHQ2 334 aaKnown RBP13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 A8MWL6 223 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 IGLC2P0DOY2 106 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 CD24P25063 80 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 TMEM136Q6ZRR5 245 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 FAM110DQ8TAY7 271 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 ATP6V0BQ99437 205 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 ZFP30Q9Y2G7 519 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 PKD1L2Q7Z442 2459 aa13.94□□□□□ -0.18
HLA-DQB1-204ENST00000399084 TRAV34A0A0B4J273 112 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 NPFFO15130 113 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 IL4P05112 153 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 RAB9AP51151 201 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 CTAG1AP78358 180 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 PAX8Q06710 450 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 OR4B1Q8NGF8 309 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 AJUBAQ96IF1 538 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 PIMREGQ9BSJ6 248 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 FAM103A1Q9BTL3 118 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 COL6A6A6NMZ7 2263 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 ZZEF1O43149 2961 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 SAA4P35542 130 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 GNG5P63218 68 aa13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 DAZAP1Q96EP5 407 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB1-204ENST00000399084 NDUFB8O95169 186 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 GZMBP10144 247 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 EGR2P11161 476 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 TPPP2P59282 170 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 PKIAP61925 76 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 Q56UQ5 140 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 LEMD1Q68G75 181 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 TMEM75Q8N9X5 138 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 RPP21Q9H633 154 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 NBASA2RRP1 2371 aa13.92□□□□□ -0.18
HLA-DQB1-204ENST00000399084 C19orf71A6NCJ1 209 aa13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 MRPS12O15235 138 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 IGHV4-39P01824 125 aa13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 RPL7P18124 248 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 NDPQ00604 133 aa13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 PSG9Q00887 426 aa13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 IQCJQ1A5X6 159 aa13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 PRDM13Q9H4Q3 707 aa13.91□□□□□ -0.18
HLA-DQB1-204ENST00000399084 CENPVL3A0A0U1RRI6 287 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 TSTD3H0UI37 97 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms