RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 MARC2Q969Z3 335 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 PPP1R14BQ96C90 147 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 GNPNAT1Q96EK6 184 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 ARV1Q9H2C2 271 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 MRPL27Q9P0M9 148 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 IGHV3OR16-13A0A075B7E8 117 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 IGHV3-74A0A0B4J1X5 117 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 SAP30O75446 220 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 EIF5AP63241 154 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 PRR31Q5SQ13 230 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 ADAMTSL5Q6ZMM2 481 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 NARS2Q96I59 477 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 PSMG3Q9BT73 122 aaPredicted RBP17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 SH3BGRL3Q9H299 93 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 SMPXQ9UHP9 88 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 HIGD1AQ9Y241 93 aa17.92■□□□□ 0.46
TSPAN4-203ENST00000397397 APOHP02749 345 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-203ENST00000397397 C8orf88P0DMB2 117 aa17.91■□□□□ 0.46
TSPAN4-203ENST00000397397 PATE2Q6UY27 113 aa17.91■□□□□ 0.46
TSPAN4-203ENST00000397397 OR1L4Q8NGR5 311 aa17.91■□□□□ 0.46
TSPAN4-203ENST00000397397 MCRIP2Q9BUT9 160 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-203ENST00000397397 IGHV3-66A0A0C4DH42 116 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 C10orf113Q5VZT2 155 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 DYNLRB2Q8TF09 96 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 PFDN5Q99471 154 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 RHPN1-AS1Q9BWJ2 59 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 SLC25A32Q9H2D1 315 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 DNAJC4Q9NNZ3 241 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 PFDN2Q9UHV9 154 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 BOLA1Q9Y3E2 137 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 U3KQE9 123 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 CMYA5Q8N3K9 4069 aa17.9■□□□□ 0.46
TSPAN4-203ENST00000397397 ELOA3CA0A087WX78 387 aaPredicted RBP17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 A0A1W2PS18 150 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 TPT1P13693 172 aaKnown RBP17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 IGLL1P15814 213 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 BMI1P35226 326 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 GCSAMLQ5JQS6 135 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 SLC51BQ86UW2 128 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 OR2G3Q8NGZ4 309 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 TMEM37Q8WXS4 190 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 ST8SIA2Q92186 375 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 SIGLEC8Q9NYZ4 499 aa17.89■□□□□ 0.46
TSPAN4-203ENST00000397397 VWFP04275 2813 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 CHEK1O14757 476 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 S100A7P31151 101 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 C9orf66Q5T8R8 295 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 BAP18Q8IXM2 172 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 STOML3Q8TAV4 291 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 UHRF2Q96PU4 802 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 SELENOKQ9Y6D0 94 aa17.89■□□□□ 0.45
TSPAN4-203ENST00000397397 SERF2P84101 59 aa17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 ACOT6Q3I5F7 207 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 S100A7AQ86SG5 101 aa17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 GATAD1Q8WUU5 269 aa17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 GRAMD2BQ96HH9 432 aa17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 SLC25A39Q9BZJ4 359 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 TMEM231Q9H6L2 316 aa17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 VSIRQ9H7M9 311 aa17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 MLXQ9UH92 298 aa17.88■□□□□ 0.45
TSPAN4-203ENST00000397397 H3BRN7 92 aa17.87■□□□□ 0.45
TSPAN4-203ENST00000397397 SPP1P10451 314 aa17.87■□□□□ 0.45
TSPAN4-203ENST00000397397 LINC00305Q7Z4B0 112 aa17.87■□□□□ 0.45
TSPAN4-203ENST00000397397 SHANK2-AS3Q9BTD1 123 aa17.87■□□□□ 0.45
TSPAN4-203ENST00000397397 ZNF98A6NK75 572 aa17.86■□□□□ 0.45
TSPAN4-203ENST00000397397 BUB3O43684 328 aa17.86■□□□□ 0.45
TSPAN4-203ENST00000397397 SCRT1Q9BWW7 348 aa17.86■□□□□ 0.45
TSPAN4-203ENST00000397397 TECRQ9NZ01 308 aaKnown RBP17.86■□□□□ 0.45
TSPAN4-203ENST00000397397 M6PRP20645 277 aa17.85■□□□□ 0.45
TSPAN4-203ENST00000397397 INSL3P51460 131 aa17.85■□□□□ 0.45
TSPAN4-203ENST00000397397 RAB2AP61019 212 aa17.85■□□□□ 0.45
TSPAN4-203ENST00000397397 DEFB114Q30KQ6 69 aa17.85■□□□□ 0.45
TSPAN4-203ENST00000397397 C16orf54Q6UWD8 224 aa17.85■□□□□ 0.45
TSPAN4-203ENST00000397397 RNF2Q99496 336 aa17.85■□□□□ 0.45
TSPAN4-203ENST00000397397 SLC25A22Q9H936 323 aa17.85■□□□□ 0.45
TSPAN4-203ENST00000397397 MBP02144 154 aa17.84■□□□□ 0.45
TSPAN4-203ENST00000397397 SEC11BP0C7V7 166 aa17.84■□□□□ 0.45
TSPAN4-203ENST00000397397 FAM78BQ5VT40 261 aa17.84■□□□□ 0.45
TSPAN4-203ENST00000397397 LEMD1Q68G75 181 aa17.84■□□□□ 0.45
TSPAN4-203ENST00000397397 GPR61Q9BZJ8 451 aa17.84■□□□□ 0.45
TSPAN4-203ENST00000397397 AKR1C8PQ5T2L2 129 aa17.83■□□□□ 0.45
TSPAN4-203ENST00000397397 C1orf194Q5T5A4 169 aa17.83■□□□□ 0.45
TSPAN4-203ENST00000397397 MORN5Q5VZ52 161 aa17.83■□□□□ 0.45
TSPAN4-203ENST00000397397 OR10G4Q8NGN3 311 aa17.83■□□□□ 0.45
TSPAN4-203ENST00000397397 OR10G9Q8NGN4 311 aa17.83■□□□□ 0.45
TSPAN4-203ENST00000397397 OR10G7Q8NGN6 311 aa17.83■□□□□ 0.45
TSPAN4-203ENST00000397397 IGLV1-51P01701 117 aa17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 TMEM41BQ5BJD5 291 aa17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 SPATA31B1PQ5VZV4 182 aa17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 TCF24Q7RTU0 167 aa17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 OR8I2Q8N0Y5 310 aa17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 TMED6Q8WW62 240 aa17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 GLMPQ8WWB7 406 aa17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 SEPSECSQ9HD40 501 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-203ENST00000397397 RHOBP62745 196 aa17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 CD300EQ496F6 205 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 EIF5AL1Q6IS14 154 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 FAM122CQ6P4D5 195 aa17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 MRPL32Q9BYC8 188 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 RNF24Q9Y225 148 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms